| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1454 |
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| Symbol | |
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| ID | 5136414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1555801 |
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| End bp | 1556583 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532912 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | YP_001217397 |
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| Protein GI | 147673397 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000138881 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATGA AAAAGTGGTT AGTTGCGACA GCATTAATTG CCACAACAAT CAGTGGGGTA
ACGCAAGCCA AAGAATGGAA AACGGTGCGT TTTGGTATTG AGGGCGCTTA TCCTCCGTTT
AGCTGGACAG AAGCCGATGG CTCTTTGAAA GGGTTTGACG TGGATATGGC CAATGCGTTG
TGTGCGGAGA TGCAAGTGGA GTGCAAAATC GTGCCACAGG ATTGGGATGG CATTATTCCT
TCACTGTTAG CGCGTAAGTA CGATGCCATT ATTGCAGCGA TGTCGATCAC TGAAGAGCGT
AAAAAGAAAG TGGATTTCAC TGGTAAGTAC GCTCAGATCC CGAACAAGTT TATTGCTAAG
AAAGGCGCGG ATTTAGCCTT CACTAAAGAA GGTTTGAAGG GCGTGAAAAT TGGTGTGCAG
CGTGCGACCA CTCACGATAA ATACATCACT GACAATTATG GTGACACGGT CGATATCGTG
CGTTATGGCT CGTTTGATGA AGCGTATTTA GACCTTGCCA ATGGCCGGAT CGCCGCAGTA
TTAGGGGATG CCTCCGCATT AGAAGAGGGC ATGCTCAACA AACCCGGTGG TGATGCTTAT
GAATTTGTTG GCCCTTCACT GACAGACCCC AAATGGTTTG GCGAAGGTAT GGGCATAGCG
GTGCGCAAGC AAGATAAAGA GCTAACCGAA AAACTCGATG CGGCGATTAC GGCACTGCGT
GAAAAAGGGA TTTATCAACA AATACAAGCT AAATACTTCA AGTATGACGT TTACGGTGAA
TAA
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| Protein sequence | MDMKKWLVAT ALIATTISGV TQAKEWKTVR FGIEGAYPPF SWTEADGSLK GFDVDMANAL
CAEMQVECKI VPQDWDGIIP SLLARKYDAI IAAMSITEER KKKVDFTGKY AQIPNKFIAK
KGADLAFTKE GLKGVKIGVQ RATTHDKYIT DNYGDTVDIV RYGSFDEAYL DLANGRIAAV
LGDASALEEG MLNKPGGDAY EFVGPSLTDP KWFGEGMGIA VRKQDKELTE KLDAAITALR
EKGIYQQIQA KYFKYDVYGE
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