Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1443 |
Symbol | |
ID | 5135985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1544550 |
End bp | 1545005 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640532901 |
Product | hypothetical protein |
Protein accession | YP_001217386 |
Protein GI | 147674744 |
COG category | [S] Function unknown |
COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000387012 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTGTT ATTGCGGAAA TACTCAACCT TACTCGCAGT GTTGCGAACC TATTCATCTC AATCCTCACA GTGCTCAAGT TCCTGAACAG CTGATGCGAG CACGTTTTAG TGCCCATATT TTAAAGAATG TTGAGTTTGT GATTGAAACA TACCATCCCT CTTGCCAAGC CAGTAATGAG CGTGATGCGA TTAGCGAATC GGTACATAGC CATTGGCTTC GCCTTGAGAT CATTTCGACC CAAATGGGCG CAACCCCTAA CGAAGGTTTT GTTCACTTTA AAGCGTTTCT TGATCAAGAG GGTAAAGTGT TTTGCCTTGA AGAGCGCTCT CGATTTCTAA AAGAAAATAA CTGTTGGTTT TATATTGACG GTGAATTTCC AGCCGCCATC AAACAAGGCC GTAACGACCC TTGTGCTTGC GGTAGTGGCA AGAAATATAA AAAGTGCTGT GGATAA
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Protein sequence | MSCYCGNTQP YSQCCEPIHL NPHSAQVPEQ LMRARFSAHI LKNVEFVIET YHPSCQASNE RDAISESVHS HWLRLEIIST QMGATPNEGF VHFKAFLDQE GKVFCLEERS RFLKENNCWF YIDGEFPAAI KQGRNDPCAC GSGKKYKKCC G
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