| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1440 |
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| Symbol | ppiB |
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| ID | 5136029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1541903 |
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| End bp | 1542397 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640532898 |
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| Product | peptidyl-prolyl cis-trans isomerase B |
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| Protein accession | YP_001217383 |
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| Protein GI | 147675691 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000002011 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCACCC TGCATACCAA TTTTGGTGAC ATCAAAATTC AGCTCAACTT TGAAAAAGCG
CCAGTAACCA GCGCAAACTT TGAGCAATAT TGCCGTGAAG GTTTCTACGA CAACACTCTC
TTTCACCGTG TGATTGACGG CTTTATGATT CAAGGCGGCG GTATGACTTC GGGACTGCGT
GAAAAAGAGA CTCGCGATCC TATTCGTAAC GAAGCAAATA ATGGTCTGAG CAATAAAGTG
GGTACGATTG CCATGGCGCG TACCATGGAT CCTCACTCAG CGAGCTCACA ATTCTTCATT
AACGTGAATA ACAACACTTT CCTCGATTTT CGTTCTGAAA GTCGTGATGG TTGGGGTTAC
TGCGTGTTTG GTGAAGTGGT TGAAGGCATG GACATCGTTA ATAAGATCAA GGGCGTGAGC
ACCGGTTCTT ATGGCATGCA CCAAGATGTC CCTCTAGAGG AAGTGGTGAT CACTGGCACC
ACTATCGAAG CTTAA
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| Protein sequence | MITLHTNFGD IKIQLNFEKA PVTSANFEQY CREGFYDNTL FHRVIDGFMI QGGGMTSGLR
EKETRDPIRN EANNGLSNKV GTIAMARTMD PHSASSQFFI NVNNNTFLDF RSESRDGWGY
CVFGEVVEGM DIVNKIKGVS TGSYGMHQDV PLEEVVITGT TIEA
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