| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1435 |
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| Symbol | cydA-1 |
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| ID | 5137568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1535953 |
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| End bp | 1537578 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532893 |
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| Product | cytochrome d ubiquinol oxidase, subunit I |
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| Protein accession | YP_001217378 |
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| Protein GI | 147674052 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000298443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAACG TGTCATTCAG CCGACACAAA GGAGTTACCA TGATCGATGT CGTTGATTTA
TCGCGGTTGC AATTTGCACT TACTGCGATG TATCACTTCC TGTTTGTTCC CCTCACTCTA
GGGATGGCAT TTTTACTTGC TATCATGGAG TCACTCTACG TCATGACCGA CAAGCAGATT
TACAAGGACA TGACCAAATT CTGGGGTAAG CTGTTCGGGA TTAACTTTGC TCTAGGTGTG
GCAACAGGCC TTACCATGGA GTTCCAGTTT GGTACCAACT GGTCTTACTA TTCTCATTAT
GTAGGTGACA TTTTTGGTGC TCCACTTGCG ATTGAAGCGC TGGTAGCCTT CTTCCTAGAA
TCTACATTTG TTGGTTTATT CTTCTTTGGG TGGGACAGAC TTTCCAAACG ACAACACTTA
GTCGTGACTT GGTTAGTCGC ATTAGGCTCA AACTTCTCTG CTCTGTGGAT TCTGGTTGCA
AACGGCTGGA TGCAAAACCC AGTAGGCTCA GAGTTTAATT TTGAAACCAT GCGTATGGAA
ATGGTGAGCT TTGCTGATGT GGTACTAAAC CCAGTTGCCC AAGTGAAGTT TGTTCACACC
GTTGCGGCAG GTTATACCAC AGGCGCAATG TTCATTTTGG GTATCAGTGC GTACTACCTA
CTGAAAGGTC GTGATGTTGC TTTTGCACGT CGTTCATTTG CGATTGCGGC ATCATTCGGT
ATGGCTTCTG TACTGTCCGT TATCGTACTG GGTGATGAAT CAGGCTATGA GCTTGGTGAA
GTTCAGCGCG TGAAACTGGC GGCGATTGAG TCTGAATGGC ACACCGAGCC AGCACCCGCA
GCGTTCACCT TGTTTGGTAT TCCAAATCAA GAAGAAATGC GCACCGACTA CGCGATCAAA
ATTCCATTTG CACTAGGGAT CATTGCAACA CGTTCACTTG ACGAACAAGT TGTAGGTCTG
CGTGATCTGC GTGATGAACA CGTTGAGCGA ATTCGTACCG GTATTTACGC TTACGATCTG
CTAGAGCGTC TGCGCGCTGG TGAAAAAACG CCGGAAAACA TGGCCGCCTT TGATGAAGTA
AAACATGATC TCGGTTATGG CCTACTTCTG AAGCGTTACA CGGATAAAGT GACGGATGCG
ACAGAAGAGC AAATCCAAGC GGCAGCGGAT GATTCTATCC CAACAGTATG GCCACTATTC
TGGTCTTTCC GCATCATGGT GGCTTGTGGC TTTATTATGC TAGTGGTGTT TGGTGCCGCC
TTTATCCAAA CCTGTCGTCA GAAGATTGAA CAGAAAAAAT GGGTTCTCAA AGCCGCGCTA
TTCAGTATTC CATTGCCTTG GATTGCGGTC GAGACAGGTT GGTTTGTCGC TGAATATGGC
CGTCAACCTT GGGCTGTCGG TGAAATTCTT CCCGTTAACG TTGCCGCTTC TGCATTGAGT
GCAGGAGAGA TCATCACTTC AATGCTGGCG ATTTTGGCAC TGTACACCAT CTTCTTGATT
GCAGAAGTGT ACTTAATGGT TAAGTTCACT CGTAAAGGCC CAAGCAGCCT GAAAACCGGA
CGGTACCATT TTGAACAAGG CGCAGAGTCT GTTCAGGATC AAGTCAACCG CCAAGTTGAA
GCATAA
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| Protein sequence | MSNVSFSRHK GVTMIDVVDL SRLQFALTAM YHFLFVPLTL GMAFLLAIME SLYVMTDKQI
YKDMTKFWGK LFGINFALGV ATGLTMEFQF GTNWSYYSHY VGDIFGAPLA IEALVAFFLE
STFVGLFFFG WDRLSKRQHL VVTWLVALGS NFSALWILVA NGWMQNPVGS EFNFETMRME
MVSFADVVLN PVAQVKFVHT VAAGYTTGAM FILGISAYYL LKGRDVAFAR RSFAIAASFG
MASVLSVIVL GDESGYELGE VQRVKLAAIE SEWHTEPAPA AFTLFGIPNQ EEMRTDYAIK
IPFALGIIAT RSLDEQVVGL RDLRDEHVER IRTGIYAYDL LERLRAGEKT PENMAAFDEV
KHDLGYGLLL KRYTDKVTDA TEEQIQAAAD DSIPTVWPLF WSFRIMVACG FIMLVVFGAA
FIQTCRQKIE QKKWVLKAAL FSIPLPWIAV ETGWFVAEYG RQPWAVGEIL PVNVAASALS
AGEIITSMLA ILALYTIFLI AEVYLMVKFT RKGPSSLKTG RYHFEQGAES VQDQVNRQVE
A
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