| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1434 |
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| Symbol | cydB-1 |
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| ID | 5135368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1534799 |
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| End bp | 1535935 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532892 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001217377 |
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| Protein GI | 147673360 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000106586 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGATT ACGAGATCTT ACGACTCATT TGGTGGGTAC TGATTGGTGT GCTCCTCGTG
GGTTTTGCCA TCACAGATGG CTTTGATATG GGCGTTGGGG CGCTAGTCCC TATCATTGGT
AAAAATGATA ACGAACGCCG AGTGATGATT AACTCTATTG CCCCACACTG GGATGGAAAC
CAAGTTTGGC TCATCACAGC CGGTGGTGCT TTGTTTGCCG CATGGCCGCT GGTTTACGCC
ACTTCATTTT CAGGTTTCTA TCTGGCTATG ATTGTGACAC TTGCTGCGCT GTGGTTACGC
CCTGTCGGTC TAGACTATCG CTCAAAAATC GAGAGCACAA AATGGCGTAA TAACTGGGAT
TTAGCGATTT CAGCATCAGG ATTCATTCCA CCGGTTATCT TTGGTGTGGC ATTCGGAAAC
CTGCTACAAG GTGTTCCTTT CCAACTGAGT GATTTCTTGA TGCCGACCTA CCATGGTTCA
TTCTTTGGTC TGCTCAATCC ATTTGCTCTG CTCTGTGGTC TTGTGAGCTT GTTCATGACT
TTGCTACAAG GCTCTGCATG GCTGCAAATG AAAACGACAT CGCATGTACA TCAACGTGCT
CGTAATGTGG CACAACTGAC CGGTTTGCTC ACCGCCGTGT GTTTTGTGGC CGCAGGCTTT
TGGGTCCAGC ACATCGACGG TTATATGATT GTTGGTGCGA TTGACGGTAA TGCCGCATCG
AATCCGCTCA ACAAAGAAGT GATTCGTGAA GCGGGTGCTT GGTTACACAA CTTTGAACAA
GTACCAGTAC TGTGGTTAGC TCCTGCACTG GGTGTATTGA TGCCTCTACT CTCGGTTTTG
GCGTCACGTC TAGATAAAGG TGGCTTGGCA TTTTTGACCT CTAGTTTAGG TAACGCTGGC
GTTATCTTCA CCGCAGGTTT CGCTATGTTC CCATTCGTTA TGCCTTCAAG TTTGAATCCG
GCCCATAGCT TGACTATGTG GGATGCAACT TCAAGCAAGC TGACGCTAGA ACTGATGACT
GTGGTTGCGG TTGTCATGGT GCCTATCATT TTGGGTTACA CCATCTGGAG TTACTACAAA
ATGTTTGGTC GTCTCGATGA TAAATTCATC GAAGATAACA AGAATTCACT GTACTAA
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| Protein sequence | MFDYEILRLI WWVLIGVLLV GFAITDGFDM GVGALVPIIG KNDNERRVMI NSIAPHWDGN
QVWLITAGGA LFAAWPLVYA TSFSGFYLAM IVTLAALWLR PVGLDYRSKI ESTKWRNNWD
LAISASGFIP PVIFGVAFGN LLQGVPFQLS DFLMPTYHGS FFGLLNPFAL LCGLVSLFMT
LLQGSAWLQM KTTSHVHQRA RNVAQLTGLL TAVCFVAAGF WVQHIDGYMI VGAIDGNAAS
NPLNKEVIRE AGAWLHNFEQ VPVLWLAPAL GVLMPLLSVL ASRLDKGGLA FLTSSLGNAG
VIFTAGFAMF PFVMPSSLNP AHSLTMWDAT SSKLTLELMT VVAVVMVPII LGYTIWSYYK
MFGRLDDKFI EDNKNSLY
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