Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1431 |
Symbol | tolR |
ID | 5137375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1532678 |
End bp | 1533118 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640532889 |
Product | tolR membrane protein |
Protein accession | YP_001217374 |
Protein GI | 147673277 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 2.87088e-16 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGCT ATCAAACCAA AAAACGTGAG ATGAAAGCAG AGATTAACGT GGTTCCTTAC ATCGACGTTA TGCTGGTTCT CCTCATTATT TTTATGGTGA CATCACCGTT TGTAACACAA GGTGTGGATG TGGAGTTGCC GAAAACTCAT TCGGCTAAAT CAGCACAAGA TCTAGCGGGT GATAGCGATT CTAGCTTTAT CATTGTTGAG ATTGATAAAG AAGGTAATCT TGGCCTGAGT GTTAATGATG AAGAAGTTCA ACGCGGTCTA TCCATCGAAG ATGTGATTGT TCGAGTGAAA GCAGAATTGT CTCTTAAACC TAATTCACCT GTGGCCGTGG GTGGCGATGC CGCTACACCT TACGCAGAGA TTGTTTTGGT ATTGGATGAG TTGGGTCAAG CTGGTATTCC TAAAGTAGGG CTACTCACGG ACCTTAAATA A
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Protein sequence | MAGYQTKKRE MKAEINVVPY IDVMLVLLII FMVTSPFVTQ GVDVELPKTH SAKSAQDLAG DSDSSFIIVE IDKEGNLGLS VNDEEVQRGL SIEDVIVRVK AELSLKPNSP VAVGGDAATP YAEIVLVLDE LGQAGIPKVG LLTDLK
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