| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1424 |
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| Symbol | |
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| ID | 5136590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1524594 |
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| End bp | 1526804 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532882 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_001217367 |
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| Protein GI | 147674034 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTATGG CTATTCGCTC CTCGCTTAAA AAGAAAAGTA TTCTAGCGCT GACCATTTAT
TTGGCCTTCT TCCTTGCGAT TGTAGGAACG CTGAGTTATT GGGGGCTTGA AGTCCCATTT
AGAAAAGAGC TGAAAAATAA TCTAGCCCTG AGAGCGGAGT TACTGGCTAC CCAAATTCGT
GAGCCATTGA ATAACTCGAT AGGGGTTCTG CAGAGTCTTA CCAGCATTGG CAAAAGCGCA
GCCGATAAGG AAGAGCAAGA GCGCATGCTG CGCTCACTAT TTTCTGTTGT TGGCGGAGTG
ATCATTAGCG GCGGGTTGTG GCCGGAACCC AATCTATCGG CAACTGACCC CTCACTACGA
TATGACAGCT TGTTTTTTAA TAAAGCAACC GATGGACAGG TTGACCAACT GAGCTCATGG
AATAACCCCA AAGCCGGGGG GTATGACCGA GAAAGCTGGT ACTTGGCTGC AGAACGTGAA
GCCGAAGGGC TCTATTTCTG GTCACCTGTC TATGTTGACC CCTATACCCG TGTGGAAATG
ATCACGGTCT CGACCCCTTA TTATCGTAAC GGTCAGTTTG CGGGCGTTGC TACCGTTGAT
CTCTCACTTG AAAGCTTAAT CCAATTCGTT GCTGCGACAG CAGAGCAGTA CAACTTAGGT
GTGAATCTTA AAGATGCCTT TGGGGTTGAG GTCGTCTCAC ATAACTTCCG CACTTATGAT
AATGCGTTGG TCAGTTACTA TAGTTTTGGC GAGTTCAATT GGCAGATTGA AGTGGTGAAT
GCTAATCAGC ATGTCGATGA AATCATCTTC GACTTAATTA TCAACATCGA AAAAGGATTG
ATGCCGATCC TGCTGCTCTG TGTGATGGTG GGGTATTTTT TAATTAGCCA TTATTGGATC
CGCCCAATTG TCTTAATTGC GAAAAAGGTG AGTGAGTCGA GAGAAGGTGA AATCATCGAT
ATTCGGTACA AATCTCAGGA TGAGATCCGC CATCTTATTG ATACGTTTAA CCAAAAAACG
ATTTACTTAG AGGCAGAGAA AGTCAAAGCT CAGGCCTCGA CCAAAGCAAA AAGTGCATTT
TTAGCCACGC TCTCTCATGA AATTCGAACG CCGATGAATG GCGTGCTCGG TACCGCGCAA
ATCCTATTGA AAGATGAATT GACCTCTAAG CAGCGACAGC ACTTAACCAG TCTCTACGAA
TCGGGCGAAC ATATGATGTC ATTGCTCAAT GAGATTTTAG ATTATTCAAA AATAGAGCAA
GGCAAATTCG AGTTGGATCA CAGCGCATTT CCGCTCAAAT CGATCATCGG CAGCATCAAA
AGTATCTACT CCAGTCTTTG TGTTGAAAAA GGACTGAAAT TCCAACTGAA CTCAGAAATT
ACCGATGGAC GATGGTACTA CGGAGACAAG GCGCGTTTGC GGCAAATTAT CTTCAATCTG
CTTAGTAATG CGGTGAAATT TACCGAAGCA GGCTTTGTCG CAATAGGGTT AAGTGAAGAA
AGCTGTGACG AAGAGAATTA CTTGATCATC AAAGTGCAGG ATACGGGGAT CGGCATCGCG
CAAGAGTCGT TAGGGCGTAT CTTTCGACCC TTTGAACAGG CGGAATCACA CACAACACGG
CGTTTTGGTG GTACAGGCTT AGGCTTGGCT ATTGTTAAAC AGATTGCGGA ATTAATGAAT
GGCACTGTTT TAGTGCAAAG TGAAGTTGGG CAGGGTTCTT GTTTTAAGGT GAGAGTTAAA
TTAGCGATTA CCGAACCAGT AACCGAAGAT GTGAAACCTA CTAAAGCCAA AACGTATCCC
GGTTTACGGG TGCTGATTGT CGAAGATAAC CGTACGAACA TCATGATTCT GGAAGCTTTT
ATGCGCAATA AAGGTTTTGA GTGCCATAGC GTGATGGATG GTGTACAAGC GATTACCGCG
TTACAGGAAA GCTCATTTGA TCTCGTTTTA ATGGATAACC ACATGCCGTT AAAAGATGGC
ATCCAAGCCA CCAGAGAAAT TCGTCAGTTG CCACTGCCGC AAGCCAAGAT ACTGTTGTTT
GGTTGTACCG CAGATGTTTT CAAAGATACC CGGGATAAAA TGCTCTCTGC AGGGGCAGAT
GACATTATCG CTAAACCCAT TGCAGAGCAT GAGCTAGATA TGGCGCTTGA ACAACACTCA
GAGCGCTTGT ACCAGTTTCA TCGCGAACCA TCTTTACCAT CGGTAGAGTA A
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| Protein sequence | MVMAIRSSLK KKSILALTIY LAFFLAIVGT LSYWGLEVPF RKELKNNLAL RAELLATQIR
EPLNNSIGVL QSLTSIGKSA ADKEEQERML RSLFSVVGGV IISGGLWPEP NLSATDPSLR
YDSLFFNKAT DGQVDQLSSW NNPKAGGYDR ESWYLAAERE AEGLYFWSPV YVDPYTRVEM
ITVSTPYYRN GQFAGVATVD LSLESLIQFV AATAEQYNLG VNLKDAFGVE VVSHNFRTYD
NALVSYYSFG EFNWQIEVVN ANQHVDEIIF DLIINIEKGL MPILLLCVMV GYFLISHYWI
RPIVLIAKKV SESREGEIID IRYKSQDEIR HLIDTFNQKT IYLEAEKVKA QASTKAKSAF
LATLSHEIRT PMNGVLGTAQ ILLKDELTSK QRQHLTSLYE SGEHMMSLLN EILDYSKIEQ
GKFELDHSAF PLKSIIGSIK SIYSSLCVEK GLKFQLNSEI TDGRWYYGDK ARLRQIIFNL
LSNAVKFTEA GFVAIGLSEE SCDEENYLII KVQDTGIGIA QESLGRIFRP FEQAESHTTR
RFGGTGLGLA IVKQIAELMN GTVLVQSEVG QGSCFKVRVK LAITEPVTED VKPTKAKTYP
GLRVLIVEDN RTNIMILEAF MRNKGFECHS VMDGVQAITA LQESSFDLVL MDNHMPLKDG
IQATREIRQL PLPQAKILLF GCTADVFKDT RDKMLSAGAD DIIAKPIAEH ELDMALEQHS
ERLYQFHREP SLPSVE
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