Gene VC0395_A1422 details

Gene Information

• Locus tag: VC0395_A1422
• Symbol: manA-2
• ID: 5136695
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 1522520
• End bp: 1523686
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640532880
• Product: mannose-6-phosphate isomerase
• Protein accession: YP_001217365
• Protein GI: 147674804
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1482] Phosphomannose isomerase
• TIGRFAM ID: [TIGR00218] mannose-6-phosphate isomerase, class I

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAACC CTATCCAAAA CTACGCATGG GGCAGTAAAA CCGCTTTGCA GCAGTTGTTT 
GAACTCGAAA ACCCAAACGA TGACCCCCAA GCAGAGCTAT GGATGGGCGC TCATCCTAAT 
GGCTGCTCCG GTATAGCCAT TAACGGCAAA ATCGTTCAAC TTTCCGACTT TATTGCGCAA 
AATCCAAACT TGATTTTGGG TGAATATACC GCGCGGCAGT TCGGCGAACT CCCTTATTTG 
TTTAAAATTT TGGCGGCGGA AAAAGCCCTC TCCATTCAGG TCCATCCGAA CAAACAGCAA 
GCGGAACGAG GTTTCGCCCA AGAGGAACAA TTAGGCATTG CGCTCACGGC TGCTCAACGA 
AATTACAAAG ACCCCAATCA CAAACCCGAA TTGGTTTATG CGCTCACCGA GTACCAAGCA 
ATGAACGGCT TTCGTGCCAA TCAGGAAATC CTTAACTACT TTATTGAGTT ATCGATAGAT 
GAGATCCAGC CTCTCGTTAA CGTATTCCAA TCAAATCCGA CAGAACAAGG GCTCAGAGAC 
TTTTTCTCAG GGTTACTCTC ATTACAGGGA GAAGCCAAAA ACCGTGCGCT TGAAGCTTTG 
ATGGCTCAAG CTAAGCAGAT TGATCTGCCT CTTTTCCAGC TGATCGTCGA ATTGGAAAAC 
CAATATCCCA ATGACATTGG TTTATTCGCT CCTCTGATGC TCAATGTGAT TACCTTACAA 
CCAGGTGAAG CGATGTTTTT AGACGCAGAA ACGCCGCACG CGTATTTACA CGGAACAGGC 
CTTGAGATTA TGGCCAACTC CGACAACGTG TTGCGCGCGG GTTTAACACC AAAATACATG 
GATATTGATG AATTGGTGGC ATGTACTCAG TTCAAACATA AGCCACTTGA ACAACTACGC 
CTTAAGCCTG AAGTCATTGA AGGGTGTGAA CAATATCCGA TCCCAGTTGC CGATTTTAAA 
TTTGCCATCA TCCCACCTAC GACTCAGCAG ACTATCGGCG TTAAGAGTGC AGAAGTTGTG 
CTGCCTCTCG ATTCTTCAAT GATATTGCGA CATGCAAATG GTGAGCAATG CCTTGTACGA 
AAAGGACAAT CTGTCTTTAT TCCGGCTTAT GCTGAGCAGT ACACCATTGA GTGTAATGGT 
CGTGTGGCAA GAGCTTTTAG CGCCTAG 

 

Protein sequence

MTNPIQNYAW GSKTALQQLF ELENPNDDPQ AELWMGAHPN GCSGIAINGK IVQLSDFIAQ 
NPNLILGEYT ARQFGELPYL FKILAAEKAL SIQVHPNKQQ AERGFAQEEQ LGIALTAAQR 
NYKDPNHKPE LVYALTEYQA MNGFRANQEI LNYFIELSID EIQPLVNVFQ SNPTEQGLRD 
FFSGLLSLQG EAKNRALEAL MAQAKQIDLP LFQLIVELEN QYPNDIGLFA PLMLNVITLQ 
PGEAMFLDAE TPHAYLHGTG LEIMANSDNV LRAGLTPKYM DIDELVACTQ FKHKPLEQLR 
LKPEVIEGCE QYPIPVADFK FAIIPPTTQQ TIGVKSAEVV LPLDSSMILR HANGEQCLVR 
KGQSVFIPAY AEQYTIECNG RVARAFSA