| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1421 |
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| Symbol | fruA-1 |
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| ID | 5137234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1520503 |
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| End bp | 1522404 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640532879 |
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| Product | PTS system, fructose-specific IIABC component |
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| Protein accession | YP_001217364 |
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| Protein GI | 147674929 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAACC AATTGATTAA TGCCGATTTA ATTCAGCTTG ATCTGCAAGC GAATTCCAAA
CAAGCCGTAT TTGAAGAACT GATAAATATT CTACATGCCC AAGGGCGAAT TTCAGATAAA
GCGGCATTCT TAAAAGATAT TCAAGCTCGT GAAGAGTTAG GTAATACCGG ATTTGAAGAT
GGTGTCGCTA TTCCGCATGC TAAAAGTGCA GCGGTGACTC AACCAGCTGT TGCAATTGGT
GTCAGCCGAG AGGGTATCGA CTATGGCGCA GAAGATGGTT TGCCTTCCAA GCTTTTTTTC
ATGATCGCCT CCCCCGATGG CGGCGATAAC CACCACATTG AAGTGCTGGC CGAACTCTCT
TCCAAACTGA TTGAAGAAGG TTTTATCGAG GCTTTTCTCA ACACCAAAAA CTCAGAGCAA
GCACTAGAAT TACTGCTGAA AAAATCCGCG CCTACACCTC TTGCAAACCA AGCAGAAAGC
AAAGGGCTGA TTATCGGTGT TACCGGTTGC CCGGCAGGTA TTGCTCACAC TTACCTTGCG
GCTGAAGCAC TGGAAAAAGG CGCGGCGGCT TTGGGTTTTG AGATCAAAGT GGAAACCAAT
GGCTCGATTG GGGTGAAAAA TAGCCCAAGT GCGGAAGAAA TTGAACGCGC TGAAGCGATT
GTGGTCGCCT GTGATAAACA AGTCGACATG GCACGCTTTG CCGGCAAACG CCTCATCAAA
ACAAATGTGA AAGCGCCAAT TCGTGATGCA CAAAAGCTGA TTAATGAAGC GCTAAGGGCG
CCAACTTATC AAGCTGAAAC GGTTAAGGCT CAATCGGTGG CAAACAAAGC CTCACAAGCT
CGCTCGGATT TGTATCGCTT TTTGATGAAT GGCGTTTCGC ACATGATCCC ATTTGTGGTA
ACTGGCGGGC TTTTAATTGC ACTGGCTCTC GCGGTGGGTG GTGAGCCAAC TGAAGCGGGT
ATGGCCATTC CAGCGGGCAG TATGTGGAAC CAAATCCTTG AAGTGGGCGT AGTGGCCTTT
ACCTTGATGA TTCCCATCCT TGCCGGCTAC ATCGCCTACG CCATTGCCGA TCGCCCTGCG
CTCTCTCCCG GTTTGATTGG TGGCTGGATT GCCAATAACG GCTCTTTTTA TGGTGCTGAC
GCAGGTACAG GGTTTATCGG TGCCATCATT GCGGGTCTCT TGGTCGGTTA TTTCGTGAAG
TGGATTACTT CCATTAACTA TCACAAGTTT ATCCAACCCC TAGTGCCGAT CATGATCGCG
CCGATCACGG CATCGCTGTT CATCGCTGGT CTGTTCATTT TCGTTATTGG CGCTCCCATT
GCGAGCCTGA TGGATGGCCT CACTGCTCTA CTGACTAGCA TGAGTTCCGG CAACGTTATT
CTGCTCGGCA TCGTACTCGG TGGCATGGCA GGCTTTGATA TGGGAGGCCC ATTCAACAAA
GTCGCTTTCC TATTCTCTGT AGGCATGATT GCCAGCGGCC AAACTCAATT TATGGGTGCG
ATGGCCTGTG CGATTCCCGT TGCACCACTT GGTATGGCAC TCGCAACAGC GATGGGTCGT
AAGCTCGAAC TGTTTGAGTC TTCTGAGCTT GAAGCAGGTA AAGCCGCAGG CGCAATGGGC
TTAGTCGGTA TCTCTGAAGG CGCGATTCCT TTTGCGGCGC AAGACCCAAT GTCAGTCATT
CCAGCCAACG TGTTGGGCTC TATGGTTGCC GCTGTCATGG CATTCTCTTT TGGCATCACC
AACAGTGTGG CTCACGGTGG CCCCGTAGTC GCCCTGCTTG GCGCAATGAA CTACCCACTG
CTTGCCCTAC TTTGTATGGC GGCTGGTGCG GGTGTCACCG CCATCACCTG TGTGACGCTC
AAAAAAATCC GCTCACAAAA GTTTGAAGCC GCTGCGGCTT AA
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| Protein sequence | MINQLINADL IQLDLQANSK QAVFEELINI LHAQGRISDK AAFLKDIQAR EELGNTGFED
GVAIPHAKSA AVTQPAVAIG VSREGIDYGA EDGLPSKLFF MIASPDGGDN HHIEVLAELS
SKLIEEGFIE AFLNTKNSEQ ALELLLKKSA PTPLANQAES KGLIIGVTGC PAGIAHTYLA
AEALEKGAAA LGFEIKVETN GSIGVKNSPS AEEIERAEAI VVACDKQVDM ARFAGKRLIK
TNVKAPIRDA QKLINEALRA PTYQAETVKA QSVANKASQA RSDLYRFLMN GVSHMIPFVV
TGGLLIALAL AVGGEPTEAG MAIPAGSMWN QILEVGVVAF TLMIPILAGY IAYAIADRPA
LSPGLIGGWI ANNGSFYGAD AGTGFIGAII AGLLVGYFVK WITSINYHKF IQPLVPIMIA
PITASLFIAG LFIFVIGAPI ASLMDGLTAL LTSMSSGNVI LLGIVLGGMA GFDMGGPFNK
VAFLFSVGMI ASGQTQFMGA MACAIPVAPL GMALATAMGR KLELFESSEL EAGKAAGAMG
LVGISEGAIP FAAQDPMSVI PANVLGSMVA AVMAFSFGIT NSVAHGGPVV ALLGAMNYPL
LALLCMAAGA GVTAITCVTL KKIRSQKFEA AAA
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