| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1419 |
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| Symbol | |
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| ID | 5135837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1519292 |
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| End bp | 1520131 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640532878 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001217363 |
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| Protein GI | 147673124 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTTG ATGATTTGAT TTCCTCGGTG CTTAATGAGC GTGAATCATT TCATCATATT
TGGTTTGCGG GTGATTTTCA TACACCGCCT GAATTCAGTT ATCAGGTGAA TTTTCCACGC
TTAGAATTGG TCTTAGGTGG AGAGTATATA AATGAAATGG AAAGTCATGA CCGTAAAGTC
ACGAAAATAA TTGCCAAAGC CGGAGATGCG ATTTTTATTC CCGCTAACTG TTGGAATAAA
CCGAACTGGG ATACCGATTG CTCAGTGTTG AGCATGTTAT TTGGACGCCG CCAACTAGGA
CTGAGTTTTG TCAGTAAGCG CAAAGGCGAA GCCAACTTTT ATGATATTCA AAAGCACAGT
ATCCAAACGC GCTCAGGGTT TGCTATTGAT AACATCTTAG AAGCGCTCAG CTCATTGGCG
CGTGAGAATT ATAAAAAACC GATGGATGAG CTGTTGCTGC AAGCTCTCCT TCAATATACC
CAGACGATGT TGAATGCGCC GACAGAGCAG CCACAAAACC GAGTGCAGGA TCTCTACCAA
GGGATCTGTA TCTATATCCA AGAGAATTTT CACCGCCCGA TCACGCGAGA AAGTATTGCT
TCGCGTTTTA GTATCTCTGC CAACCATTTA TCGAGGCTGT TTCGCCAGCA AGGGCATATG
ACCTTGGCCG ATTACATTAC GTGGGTCAGG GTTGATAGAG CAAAATTTAT GCTGAAAAAG
TACAATTTTA AGCTCAATGA AGTGTCGCTA CGTTGTGGGT TTAAAGATGT GAATTACTTC
TGCCGCGTTT TCAAAAATCG TACAGGCCGT ACACCAACGG ATTATCGTGC TTCAATTTAA
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| Protein sequence | MIFDDLISSV LNERESFHHI WFAGDFHTPP EFSYQVNFPR LELVLGGEYI NEMESHDRKV
TKIIAKAGDA IFIPANCWNK PNWDTDCSVL SMLFGRRQLG LSFVSKRKGE ANFYDIQKHS
IQTRSGFAID NILEALSSLA RENYKKPMDE LLLQALLQYT QTMLNAPTEQ PQNRVQDLYQ
GICIYIQENF HRPITRESIA SRFSISANHL SRLFRQQGHM TLADYITWVR VDRAKFMLKK
YNFKLNEVSL RCGFKDVNYF CRVFKNRTGR TPTDYRASI
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