Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1407 |
Symbol | |
ID | 5135148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1506759 |
End bp | 1507232 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640532866 |
Product | hypothetical protein |
Protein accession | YP_001217351 |
Protein GI | 147673789 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAAA TTGCCATTTT GGTGGATGTA CAAAACGTGT ATTACACCTG CCGCGAGCAA TATGGCCGGC ACTTTGATTA CAATCAGTTT TGGTCGCAAG TGACGCAAAA TCGCACGGTA GTGAAAGCCA ATGCCTATGC GATTGCCAGT AAAGATCCGC AGCAGAGGCA ATTTCATCAT ATTTTACGAG GGATTGGCTT TGAGGTGATG CTAAAACCTT TTATCCAGCG CAGTGATGGT AGCGCGAAAG GGGATTGGGA TGTCGGGATT GCCCTTGATG GCTATGAATT AGCTCAGGAG GTAGACACCG TGGTGCTCGT TTCTGGGGAT GGTGATTTTG AACCTTTGGT GACCAGAATT GCGCAACGCT TTCAGGTTAA GGTGGAAGTG TATGGCGTGC CGAAACTGAC CGCGCAACAT TTAATCGATG TCGCCAGTCA ATTTCACCCG ATTGAGCATC GTCTATTACT GTAA
|
Protein sequence | MEKIAILVDV QNVYYTCREQ YGRHFDYNQF WSQVTQNRTV VKANAYAIAS KDPQQRQFHH ILRGIGFEVM LKPFIQRSDG SAKGDWDVGI ALDGYELAQE VDTVVLVSGD GDFEPLVTRI AQRFQVKVEV YGVPKLTAQH LIDVASQFHP IEHRLLL
|
| |