Gene VC0395_A1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1403 
Symbol 
ID5135592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1502821 
End bp1503807 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content43% 
IMG OID640532861 
Producthypothetical protein 
Protein accessionYP_001217346 
Protein GI147673899 
COG category[R] General function prediction only 
COG ID[COG3596] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA CTGATTTATT CTCGACTCTA GAAAATAACA TTCTTCGCAA CTCGTTAGAT 
TCAACCACGA AAGATAAGTT ACTCAGTAAC TTATCTCTCC TTCGCAAAGC ATCACTGAAT
ATTCTGATCA CCGGTTCCAC AGGCTCTGGG AAAAGCTCCA CCATAAACGC CCTATTTGAC
ATGACGGTTG CCCAAGTCGG CATCGATAGT GATCCGCACA CGGAATCTGT TCAGTGTTAC
CACTTAAATA ATCTCGTGCT ATGGGACACT CCAGGGCTTG GAGATGGGAT CGATGAGGAT
AAAAAACACG TACAGGCCAT TAAACAGCTT CTCAACAAAC GAGATGACCA TGGTCAGTTG
GCCATTGATT TAGTTCTGGT GATACTTGAT GGCGGCTCTC GCGATCTGGG AACACCATTG
AGACTCATCA ATGACATTGT TATCCCGCAA TTAGGCGATG ATGCCGAAAA GCGGCTCATC
GTTGCGGTGA ATCAAGCCGA CGTTGCATTG AAAGGACCTG AATCATGGAA CTACAGCGAC
AATCTACCAA CGGACAAGGC TAAGGCATTT CTGGAGAAAC AACAAAACTC GATAGCAAGA
CGTATACATA AAGCCACACA GATAAATGTG AAGACTCTTT ACTTTGTGGC GGGCTACAGT
GATGGAGTCA ATCGCCAGAG GCCTTACAAT CTATCAAAAC TGCTTTATAC CATTGTCGAA
ATACTACCAA ACAATAAACG AGTAATGCTG GCAAATCGTA CCATTTCCAA TGATGCAGAT
AATTGGAAAG ATAACGATGC CAGCGATTAC AATAAAAAAA CCACCTTAAG CCTTTGGGAA
GCCATTGTAG AAACAACTTT ACAAGGCGCA TCTATTGGCT CCGATATCGG ATCTATTTTC
GGAAAACCAG GCGAGATCCT AGGTAAAGTC GTAGGCTCTG TCGCTGGTCT ATTTTTCGGT
GGTTTACGAT ATACATTTGG GTTTTAA
 
Protein sequence
MKTTDLFSTL ENNILRNSLD STTKDKLLSN LSLLRKASLN ILITGSTGSG KSSTINALFD 
MTVAQVGIDS DPHTESVQCY HLNNLVLWDT PGLGDGIDED KKHVQAIKQL LNKRDDHGQL
AIDLVLVILD GGSRDLGTPL RLINDIVIPQ LGDDAEKRLI VAVNQADVAL KGPESWNYSD
NLPTDKAKAF LEKQQNSIAR RIHKATQINV KTLYFVAGYS DGVNRQRPYN LSKLLYTIVE
ILPNNKRVML ANRTISNDAD NWKDNDASDY NKKTTLSLWE AIVETTLQGA SIGSDIGSIF
GKPGEILGKV VGSVAGLFFG GLRYTFGF