Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1403 |
Symbol | |
ID | 5135592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1502821 |
End bp | 1503807 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640532861 |
Product | hypothetical protein |
Protein accession | YP_001217346 |
Protein GI | 147673899 |
COG category | [R] General function prediction only |
COG ID | [COG3596] Predicted GTPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCA CTGATTTATT CTCGACTCTA GAAAATAACA TTCTTCGCAA CTCGTTAGAT TCAACCACGA AAGATAAGTT ACTCAGTAAC TTATCTCTCC TTCGCAAAGC ATCACTGAAT ATTCTGATCA CCGGTTCCAC AGGCTCTGGG AAAAGCTCCA CCATAAACGC CCTATTTGAC ATGACGGTTG CCCAAGTCGG CATCGATAGT GATCCGCACA CGGAATCTGT TCAGTGTTAC CACTTAAATA ATCTCGTGCT ATGGGACACT CCAGGGCTTG GAGATGGGAT CGATGAGGAT AAAAAACACG TACAGGCCAT TAAACAGCTT CTCAACAAAC GAGATGACCA TGGTCAGTTG GCCATTGATT TAGTTCTGGT GATACTTGAT GGCGGCTCTC GCGATCTGGG AACACCATTG AGACTCATCA ATGACATTGT TATCCCGCAA TTAGGCGATG ATGCCGAAAA GCGGCTCATC GTTGCGGTGA ATCAAGCCGA CGTTGCATTG AAAGGACCTG AATCATGGAA CTACAGCGAC AATCTACCAA CGGACAAGGC TAAGGCATTT CTGGAGAAAC AACAAAACTC GATAGCAAGA CGTATACATA AAGCCACACA GATAAATGTG AAGACTCTTT ACTTTGTGGC GGGCTACAGT GATGGAGTCA ATCGCCAGAG GCCTTACAAT CTATCAAAAC TGCTTTATAC CATTGTCGAA ATACTACCAA ACAATAAACG AGTAATGCTG GCAAATCGTA CCATTTCCAA TGATGCAGAT AATTGGAAAG ATAACGATGC CAGCGATTAC AATAAAAAAA CCACCTTAAG CCTTTGGGAA GCCATTGTAG AAACAACTTT ACAAGGCGCA TCTATTGGCT CCGATATCGG ATCTATTTTC GGAAAACCAG GCGAGATCCT AGGTAAAGTC GTAGGCTCTG TCGCTGGTCT ATTTTTCGGT GGTTTACGAT ATACATTTGG GTTTTAA
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Protein sequence | MKTTDLFSTL ENNILRNSLD STTKDKLLSN LSLLRKASLN ILITGSTGSG KSSTINALFD MTVAQVGIDS DPHTESVQCY HLNNLVLWDT PGLGDGIDED KKHVQAIKQL LNKRDDHGQL AIDLVLVILD GGSRDLGTPL RLINDIVIPQ LGDDAEKRLI VAVNQADVAL KGPESWNYSD NLPTDKAKAF LEKQQNSIAR RIHKATQINV KTLYFVAGYS DGVNRQRPYN LSKLLYTIVE ILPNNKRVML ANRTISNDAD NWKDNDASDY NKKTTLSLWE AIVETTLQGA SIGSDIGSIF GKPGEILGKV VGSVAGLFFG GLRYTFGF
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