Gene VC0395_A1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1400 
Symbol 
ID5135830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1501215 
End bp1501676 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content40% 
IMG OID640532858 
Producthypothetical protein 
Protein accessionYP_001217343 
Protein GI147674002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATAT CAGAGCGCTT AAAGAGCGTT ATAGATGCCA AGTTCTCAAC ATTAAAAGGT 
GCATCAGAGT TTACTGGGAT TCCATATCGT TCACTGCAAA GCTATGTGTC AGGTAAACAA
TCTCCTGGAA GTGAAGCGTT GGTTACGCTT CATAAGACAC TAAGGGTCGA TTTGAATTGG
CTTTTGACTG GAGAAGAAAA TAGCTGGCCG ACAACAGAGG ACCGAAAAGA GGTATGTGTT
AACTTAATGG AATATATAGA AATGGAATTT GAAGCAGAAT CTGGCACAAA GCCATATTGC
GGTGATATTG CCACAATCTA CAACCGTGTT CTTCATCACA AGGGAGTAGA AGCGGAACCA
TGGGACAATG TAGAAGCTCT AAAGCGAGCC GTAAAATATG AAGTTCTGGG TTTTATCAAC
ATGCAAACCA GAATAAAAAG GCAATTAGGG TTTAGAATGT AG
 
Protein sequence
MSISERLKSV IDAKFSTLKG ASEFTGIPYR SLQSYVSGKQ SPGSEALVTL HKTLRVDLNW 
LLTGEENSWP TTEDRKEVCV NLMEYIEMEF EAESGTKPYC GDIATIYNRV LHHKGVEAEP
WDNVEALKRA VKYEVLGFIN MQTRIKRQLG FRM