| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1386 |
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| Symbol | orfB |
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| ID | 5137151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1490622 |
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| End bp | 1491494 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640532844 |
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| Product | transposase OrfAB, subunit B |
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| Protein accession | YP_001217329 |
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| Protein GI | 147675565 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAATCA AGAAACTCAA GCAGAGCCAC AGCGTAAAAA TATTATGCGA AGTCTTCAAT
GTTCATCGAA GTAGTTATCA CTATTGGCTT AAACGCCCAG CGTTAATTAA TGCGGAAACA
ATAAAACTGC GCAGCTTGAT TAGCGAGGCT CACGCCGCAA GCAATGGCTC TGCGGGAGCG
AGAACCATTG CAGATATAGT CACAAATCAG GGTGTAAAGC TGAGCCGATA CCGAGCAACA
AAGCTAATGA GAACTCTTGG TTTAGTAAGC TGCCAAGAAC CAAAGCATCG TTACAGAAAG
GCTTCACAAG AACATATTGA CGTTCCAAAT CACTTAAGTC GTCAATTTGC TGTTACGGCT
CCAAATGAAG TCTGGGCTGG CGATGTTACG TATATTTGGA CTGGTAATCG GTGGATGTAT
TTAGCGGTCG TTATCGATCT TTTTGCCCGC AAAGTGATCG GTTGGTCAAT GTCTTTGTCG
CCTGATAGTC GGTTGACAGG TAAAGCGCTG TCTATGGCCT ATGAATCTCG CGGAAAGCCA
AAAGGTGTCA TGTTCCATAG CGATCAAGGC AGTCATTATA CTAGCCGTAA ATACCGTCAA
TTACTGTGGC GCTTTCAAAT AAAACAGAGT TTATCTCGCC GAGGAAACTG TTGGGATAAT
GCGCCGATAG AGCGCTTCTT TAGAAGTCTG AAGACGGAAT GGGTGCCAAC TGTGGGTTAT
CGTAGCTTCG CTGAGGCTCA ACAAGAGATC ACCCGCTACA TTATCGGATA TTACTGCCAA
CTCAGGCCAC ATCAGTATAA CGGTGGTCTA ACTCCCAATG AATCAGAACG ATTATATTGG
GAAAACTCTA AAACCGTGGC CAATTTTAGT TGA
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| Protein sequence | MIIKKLKQSH SVKILCEVFN VHRSSYHYWL KRPALINAET IKLRSLISEA HAASNGSAGA
RTIADIVTNQ GVKLSRYRAT KLMRTLGLVS CQEPKHRYRK ASQEHIDVPN HLSRQFAVTA
PNEVWAGDVT YIWTGNRWMY LAVVIDLFAR KVIGWSMSLS PDSRLTGKAL SMAYESRGKP
KGVMFHSDQG SHYTSRKYRQ LLWRFQIKQS LSRRGNCWDN APIERFFRSL KTEWVPTVGY
RSFAEAQQEI TRYIIGYYCQ LRPHQYNGGL TPNESERLYW ENSKTVANFS
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