| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1381 |
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| Symbol | nanH |
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| ID | 5137230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1486334 |
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| End bp | 1488757 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532839 |
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| Product | neuraminidase |
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| Protein accession | YP_001217324 |
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| Protein GI | 147673281 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4409] Neuraminidase (sialidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCAATCA AGATGACTTC ACAACGAAGA AGAGCATCGA TTCACAAGGA AACAGATTCT
AATATAAAGG GAGTAGATAT GCGTTTCAAA AACGTAAAGA AAACCGCTTT AATGCTTGCA
ATGTTCGGTA TGGCGACAAG CTCAAACGCC GCACTTTTTG ACTATAACGC AACGGGTGAC
ACTGAGTTTG ACAGTCCAGC CAAACAGGGA TGGATGCAAG ACAACACGAA TAATGGCAGC
GGCGTTTTAA CCAATGCAGA TGGAATGCCC GCTTGGTTGG TGCAAGGTAT TGGAGGGAGA
GCTCAATGGA CATATTCTCT CTCTACTAAT CAACATGCCC AAGCATCAAG TTTCGGTTGG
CGAATGACGA CAGAAATGAA AGTGCTCAGT GGTGGAATGA TCACAAACTA CTACGCCAAC
GGCACTCAGC GTGTCTTACC CATCATTTCA TTAGATAGCA GTGGTAACTT AGTTGTTGAG
TTTGAAGGGC AAACTGGACG CACCGTTTTG GCAACCGGCA CAGCAGCAAC GGAATATCAT
AAATTTGAAT TGGTATTCCT TCCTGGAAGT AACCCATCCG CTAGCTTTTA CTTCGATGGC
AAACTCATTC GTGACAACAT CCAGCCGACT GCATCAAAAC AAAATATGAT CGTATGGGGG
AATGGCTCAT CAAATACGGA TGGTGTCGCC GCTTATCGTG ATATTAAGTT TGAAATTCAA
GGCGACGTCA TCTTCAGAGG CCCAGACCGT ATACCGTCCA TTGTAGCAAG TAGCGTAACA
CCAGGGGTGG TAACCGCATT TGCAGAGAAA CGTGTGGGGG GAGGAGATCC CGGTGCTCTG
AGTAATACCA ATGACATAAT CACTCGTACC TCACGAGATG GCGGTATAAC TTGGGATACC
GAGCTCAACC TCACTGAGCA AATCAATGTC AGTGATGAGT TTGATTTCTC CGATCCTCGG
CCTATCTATG ATCCTTCCTC CAATACGGTT CTTGTCTCTT ATGCTCGATG GCCGACCGAT
GCCGCTCAAA ACGGAGATCG AATAAAACCA TGGATGCCAA ACGGTATTTT TTACAGCGTC
TATGATGTTG CATCAGGGAA CTGGCAAGCG CCTATCGATG TTACCGATCA GGTGAAAGAA
CGCAGTTTCC AAATCGCTGG TTGGGGTGGT TCAGAGCTGT ATCGCCGAAA TACCAGCCTA
AATAGCCAGC AAGACTGGCA ATCAAACGCT AAGATCCGAA TTGTTGATGG TGCAGCGAAC
CAGATACAAG TTGCCGATGG TAGCCGAAAA TATGTTGTCA CACTGAGTAT TGATGAATCA
GGTGGTCTAG TCGCTAATCT AAACGGTGTT AGTGCTCCGA TTATCCTGCA ATCTGAACAC
GCAAAGGTAC ACTCTTTCCA TGACTACGAA CTTCAATATT CGGCGTTAAA CCACACCACA
ACGTTATTCG TGGATGGTCA GCAAATCACA ACTTGGGCTG GCGAAGTATC GCAGGAGAAC
AACATTCAGT TTGGTAATGC GGATGCCCAA ATTGACGGCA GACTGCATGT GCAAAAAATT
GTTCTCACAC AGCAAGGCCA TAACCTCGTG GAGTTTGATG CTTTCTATTT AGCACAGCAA
ACCCCTGAAG TAGAGAAAGA CCTTGAAAAG CTTGGTTGGA CAAAAATTAA AACGGGCAAC
ACCATGAGTT TGTATGGAAA TGCCAGTGTC AACCCAGGAC CGGGTCATGG CATCACCCTT
ACTCGACAAC AAAATATCAG TGGCAGCCAA AACGGCCGCT TGATCTACCC AGCGATTGTG
CTTGATCGTT TCTTCTTGAA CGTCATGTCT ATTTACAGTG ATGATGGCGG TTCAAACTGG
CAAACCGGTT CAACACTCCC TATCCCCTTT CGCTGGAAGA GTTCGAGTAT CCTAGAAACT
CTCGAACCTA GTGAAGCTGA TATGGTTGAA CTCCAAAACG GTGATCTACT CCTTACTGCA
CGCCTTGATT TTAACCAAAT CGTTAATGGT GTGAACTATA GCCCACGCCA GCAATTTTTG
AGTAAAGATG GTGGAATCAC GTGGAGCCTA CTTGAGGCTA ACAACGCTAA CGTCTTTAGC
AATATCAGTA CTGGTACCGT TGATGCTTCT ATTACTCGGT TCGAGCAAAG TGACGGTAGC
CATTTCTTAC TCTTTACTAA CCCACAAGGA AACCCTGCGG GGACAAATGG CAGGCAAAAT
CTAGGCTTAT GGTTTAGCTT CGATGAAGGG GTGACATGGA AAGGACCAAT TCAACTTGTT
AATGGTGCAT CGGCATATTC TGATATTTAT CAATTGGATT CGGAAAATGC GATTGTCATT
GTTGAAACGG ATAATTCAAA TATGCGAATT CTTCGTATGC CTATCACATT GCTAAAACAG
AAGCTGACCT TATCGCAAAA CTAA
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| Protein sequence | MSIKMTSQRR RASIHKETDS NIKGVDMRFK NVKKTALMLA MFGMATSSNA ALFDYNATGD
TEFDSPAKQG WMQDNTNNGS GVLTNADGMP AWLVQGIGGR AQWTYSLSTN QHAQASSFGW
RMTTEMKVLS GGMITNYYAN GTQRVLPIIS LDSSGNLVVE FEGQTGRTVL ATGTAATEYH
KFELVFLPGS NPSASFYFDG KLIRDNIQPT ASKQNMIVWG NGSSNTDGVA AYRDIKFEIQ
GDVIFRGPDR IPSIVASSVT PGVVTAFAEK RVGGGDPGAL SNTNDIITRT SRDGGITWDT
ELNLTEQINV SDEFDFSDPR PIYDPSSNTV LVSYARWPTD AAQNGDRIKP WMPNGIFYSV
YDVASGNWQA PIDVTDQVKE RSFQIAGWGG SELYRRNTSL NSQQDWQSNA KIRIVDGAAN
QIQVADGSRK YVVTLSIDES GGLVANLNGV SAPIILQSEH AKVHSFHDYE LQYSALNHTT
TLFVDGQQIT TWAGEVSQEN NIQFGNADAQ IDGRLHVQKI VLTQQGHNLV EFDAFYLAQQ
TPEVEKDLEK LGWTKIKTGN TMSLYGNASV NPGPGHGITL TRQQNISGSQ NGRLIYPAIV
LDRFFLNVMS IYSDDGGSNW QTGSTLPIPF RWKSSSILET LEPSEADMVE LQNGDLLLTA
RLDFNQIVNG VNYSPRQQFL SKDGGITWSL LEANNANVFS NISTGTVDAS ITRFEQSDGS
HFLLFTNPQG NPAGTNGRQN LGLWFSFDEG VTWKGPIQLV NGASAYSDIY QLDSENAIVI
VETDNSNMRI LRMPITLLKQ KLTLSQN
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