Gene VC0395_A1380 details

Gene Information

• Locus tag: VC0395_A1380
• Symbol: nagA-2
• ID: 5135490
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 1484853
• End bp: 1485989
• Gene Length: 1137 bp
• Protein Length: 378 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640532838
• Product: N-acetylglucosamine-6-phosphate deacetylase
• Protein accession: YP_001217323
• Protein GI: 147674908
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1820] N-acetylglucosamine-6-phosphate deacetylase
• TIGRFAM ID: [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTAA AGGCAATTTC AGCCACACGG CTTTTTGATG GAATTCAGTA TTACGAGAAT 
GCGGCAATGG TTTGGGAAGG TTCACACATT CACTCCATTG TTCCTATTGA GTCTCTGACG 
GAGGATATTG AGCATCAACA TTTTGATGGT GCATTGATCG CTCCAGGATT CATTGACTTA 
CAAGTTAATG GCGGTGGCGA TGTCATGTTC AATAATGACA TGACTCTTGC GGGTATTGAT 
TCGATCTGCC GAGCACACAG AACTCACGGC ACCGCCTATC TGCTTCCAAC CTTAATCAGT 
GCAACACCGG AACACATCAA CCGTGCACTT GATGCCATTC AATCTGCAAT CGAAAATCAA 
GTCTCGGGTG TGTTGGGTAT TCACTTAGAG GGGCCTTGGT TAAACCCAGA AAAGAAAGGC 
GCTCATAACC CAGATCTGTT CTATTCCCCG ACACCCGAAC AACTTTCACA GTTTCACTGG 
CCAACCAAAG GCAAAGTTCT TGTAACGGTC GCGGCTGAAA ACCTCTCCAT CGACTCACTA 
AAGTGGTTAA AGGATCATCA TGTTACTCTC TCGTGTGGTC ACAGTAATGC CACTACAGCC 
CAATTAACCA CTGAGAAGTT AGCTCTCATT GATGGATTTA CCCACTTATT TAATGCCATG 
TCGCCTTTTG AGAGTCGTGA ACCCGGAGTT GTCGGTACAG CATTGAATAC CGATCATGCT 
TGGTGTTCAG TAATAACTGA TGGAATTCAT GTCCATCCAC AAAGTTTTTT ACTCGCTAAG 
CGAATCAAAC CTAAAGACAA ACTTCTTATT GTTACCGATG CCATGGCTAG CCTTGGCAGT 
GTGACTAGCC AGTTTGAATT GGATGGGGAA ACCATTCGCG TCATCGATAA TAAACTGATT 
AATAGCAGAG GCAATCTTGC GGGAGCACAC ATCGGGATGG ATGAATCGGT TGCCAATGTT 
ATTCGTTGGG GAATCGCGGA AGATGAAGCA TTAAAAATGG CCTCGTCTTA TCCGGCTCAA 
GCAATTCAAT GTGATGATTT AGGGCAACTA AAACCCAATT ATCGAGCCGC CGCCACTGTA 
TTAAACTCCA AATATGAAAG CTTGGCTGTA GTCAGTGAAG GCGTGCTCTA CAACTGA 

 

Protein sequence

MALKAISATR LFDGIQYYEN AAMVWEGSHI HSIVPIESLT EDIEHQHFDG ALIAPGFIDL 
QVNGGGDVMF NNDMTLAGID SICRAHRTHG TAYLLPTLIS ATPEHINRAL DAIQSAIENQ 
VSGVLGIHLE GPWLNPEKKG AHNPDLFYSP TPEQLSQFHW PTKGKVLVTV AAENLSIDSL 
KWLKDHHVTL SCGHSNATTA QLTTEKLALI DGFTHLFNAM SPFESREPGV VGTALNTDHA 
WCSVITDGIH VHPQSFLLAK RIKPKDKLLI VTDAMASLGS VTSQFELDGE TIRVIDNKLI 
NSRGNLAGAH IGMDESVANV IRWGIAEDEA LKMASSYPAQ AIQCDDLGQL KPNYRAAATV 
LNSKYESLAV VSEGVLYN