| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1377 |
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| Symbol | dctP-1 |
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| ID | 5137567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1482096 |
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| End bp | 1483061 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532835 |
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| Product | C4-dicarboxylate-binding periplasmic protein |
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| Protein accession | YP_001217320 |
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| Protein GI | 147673037 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACCA TTAATAAGAT TACTATCGCA ATACTTACTT TGAGTGCTGC TGCTTCTGTC
AATGCTGCGA CGACTTTAAA GATGGGGATG CAAGCTTCTG TGGGGTCTGT AGAGTATAAC
TCGGCAAAAA TGCTTGCCGA CACATTAGAA GAAATGAGTC AAGGAGAGAT CAAACTCGCT
TTGTACCCAA GCGCCCAGCT TGGTGATGAT CGTGCCATGC TTCAGCAATT GACGCTGGGA
GATCTCGATA TAACTTATGC TGAGTTTGGT CGTATGGGGC TTTGGATACC GCGAGCAGAA
GCGGTCATGC TCCCTTATGT CGCGAAAGAT TTTGACCATT TACGCCGCAT GTTTGAATCT
GACTTTGGTC AAGGTGTTCG TGATGAAATG CTCCAGAAGT TCAACTGGCG TGCTTTGGAC
ACTTGGTATA ACGGTACCCG TGAAACCACT TCAAACCGTC CCCTCAATTC GATTGAAGAT
TTTAAAGGGT TAAAACTTCG AGTCCCGAAT GCTAAGCAAA ACCTCAACTA TGCAAAGCTG
TCTGGTGCCT CGCCAACCCC GATGTCATTC TCTGAAGTTT ATTTAGCGCT GCAGACCAAT
GCCGTAGATG GGCAAGAAAA CCCGCTACCA ACAATTAAAA CAATGAAGTT CTATGAAGTG
CAAAAGAACT TAGCCATGAC ACATCATATT GTTAACGATC AAATGGTGAT CATTTCGGAA
TCTACTTGGC AGAAGCTTTC TGATACGGAT AAAGACATCA TTCAGAAAGC CGTGCAGAAA
GTGGGAGATG CTCATACACA GACCGTTAAA ACTCAAGAGG CAGAATTGGT CTCCTTCTTC
AAGAGTGAAG GTATCAACGT GACTTACCCA GATCTGGAGC CATTCCGAGA AGCGATGCAA
CCACTTTACA AGGAGTTTGA CAGTAACATC GGTCAGCCGA TTGTGTCGAA ATTGGCAGCA
ATGTAA
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| Protein sequence | MKTINKITIA ILTLSAAASV NAATTLKMGM QASVGSVEYN SAKMLADTLE EMSQGEIKLA
LYPSAQLGDD RAMLQQLTLG DLDITYAEFG RMGLWIPRAE AVMLPYVAKD FDHLRRMFES
DFGQGVRDEM LQKFNWRALD TWYNGTRETT SNRPLNSIED FKGLKLRVPN AKQNLNYAKL
SGASPTPMSF SEVYLALQTN AVDGQENPLP TIKTMKFYEV QKNLAMTHHI VNDQMVIISE
STWQKLSDTD KDIIQKAVQK VGDAHTQTVK TQEAELVSFF KSEGINVTYP DLEPFREAMQ
PLYKEFDSNI GQPIVSKLAA M
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