| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1376 |
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| Symbol | |
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| ID | 5135607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1481524 |
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| End bp | 1482045 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640532834 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217319 |
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| Protein GI | 147675211 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTTA AGATGTTACG TAAGATAATT AATAATATTG AAGAAATCAT TACTGTGCCT
CTAATGGCGG CCTTGCTTGC TGTTTTGACT TGGCAAATTG GTACCCGTTG GCTTCTCAAT
GATCCTTCTT TGTGGAGTGA AGAGCTTGCC CGATTACTCT TCATGTATAT GTGTTTAGTG
GGATGTGCTA TCGCCATTAA ACGAAGTTCT CACGTCAATA TCACTTTTTT CTCTGACAAA
CTTCCTGAAA AGGCGCGCTT GTCTTTAGTC CTATCGTTAG AGATTGCCGT GCTGGTTTCT
ATTGGTGCAA TCATTGTGCT CGGCTATCAA CATGCCCAGC GTAATGCATT CTTTGAATTG
ATCACATTAG GGATATCGAG TAGCTGGATG AATTATAGCT TACCTGTGGG TGGCGTGTTT
ATGGTGTTTA GACAACTCGA AAAAATCTTT AACCTTATGA AGCTGCTACT GGGTGTTAGC
TCATCTGCTT CATTAATTGA TCAGCAAGTA ACGGAGAGGT AG
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| Protein sequence | MELKMLRKII NNIEEIITVP LMAALLAVLT WQIGTRWLLN DPSLWSEELA RLLFMYMCLV
GCAIAIKRSS HVNITFFSDK LPEKARLSLV LSLEIAVLVS IGAIIVLGYQ HAQRNAFFEL
ITLGISSSWM NYSLPVGGVF MVFRQLEKIF NLMKLLLGVS SSASLIDQQV TER
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