Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1370 |
Symbol | |
ID | 5137478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1474988 |
End bp | 1475848 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640532828 |
Product | hypothetical protein |
Protein accession | YP_001217313 |
Protein GI | 147675105 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCAT GGCCAATTCG ATGGGATCTG CTGTTTCGAT ACCGAATGAT TGAGATTATT GCTTTATGGG AAGGGCGTTT GACCACCAAC CATCTGATCC AGAGCTTTGG TATCGGGCGT CAACAAGCTT CTAAAGACAT CAATACTTAT CTTGCGGATA TTGCACCTGG CAACTTGGTT TACGATAAGC ACCTCAAAGG CTATAAGCCC AGTGATAGCT TTAGCCCTAA ACTCACCTCC GGCCATGCCG ATGAATACTT GCATATTCTT TCGCGTAGTG AGGATATGAC GGTCACTTTT AATGAGCTCG ATATGGGCTT TGAACATTCC ACTATGGTTC GCCCAGTAAC ACGCAACATT TCGCCACAAG TATTACGTCC TTTGGTGCAG GCGATACGAG AGAAAAAACG TGTCGATATT TGCTACACAT CGCTAAAAGA TGGTGAGCAA TCTGAGCGCA TTATTTCCCC GCATACTCTT GTTTGCACAC CATTACGCTG GCACGTTCGC GCTTATTGTG AACAGGCTGG TGGCTATCGT GATTTTGTCT TAAGCCGCAT ACAAGGTATT CCTGACATCA ACAATAATGC GATACACGGT AAACGTGACG ATGTACTTTG GAATACCAAA GTGAACGTAG AACTCATCCC CGATCTTCGC CTAAATGAAA AACAACGCGC GGTGATAGAA AAAGATTATG CGATGAGTGA CGGCGTTTTG CGAATTGCCA CCAACGCGTC ACTCGTTCGC TATGTGCTTG ATACCTATAA CATTGATATC CATGTACAAA AATCTAATCC TCAAGGACAA CAGATTGTGC TGGGGAATCG GGATGAGCTT ATATCCTACG TTTTGGAGTA G
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Protein sequence | MSAWPIRWDL LFRYRMIEII ALWEGRLTTN HLIQSFGIGR QQASKDINTY LADIAPGNLV YDKHLKGYKP SDSFSPKLTS GHADEYLHIL SRSEDMTVTF NELDMGFEHS TMVRPVTRNI SPQVLRPLVQ AIREKKRVDI CYTSLKDGEQ SERIISPHTL VCTPLRWHVR AYCEQAGGYR DFVLSRIQGI PDINNNAIHG KRDDVLWNTK VNVELIPDLR LNEKQRAVIE KDYAMSDGVL RIATNASLVR YVLDTYNIDI HVQKSNPQGQ QIVLGNRDEL ISYVLE
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