Gene VC0395_A1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1370 
Symbol 
ID5137478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1474988 
End bp1475848 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content45% 
IMG OID640532828 
Producthypothetical protein 
Protein accessionYP_001217313 
Protein GI147675105 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAT GGCCAATTCG ATGGGATCTG CTGTTTCGAT ACCGAATGAT TGAGATTATT 
GCTTTATGGG AAGGGCGTTT GACCACCAAC CATCTGATCC AGAGCTTTGG TATCGGGCGT
CAACAAGCTT CTAAAGACAT CAATACTTAT CTTGCGGATA TTGCACCTGG CAACTTGGTT
TACGATAAGC ACCTCAAAGG CTATAAGCCC AGTGATAGCT TTAGCCCTAA ACTCACCTCC
GGCCATGCCG ATGAATACTT GCATATTCTT TCGCGTAGTG AGGATATGAC GGTCACTTTT
AATGAGCTCG ATATGGGCTT TGAACATTCC ACTATGGTTC GCCCAGTAAC ACGCAACATT
TCGCCACAAG TATTACGTCC TTTGGTGCAG GCGATACGAG AGAAAAAACG TGTCGATATT
TGCTACACAT CGCTAAAAGA TGGTGAGCAA TCTGAGCGCA TTATTTCCCC GCATACTCTT
GTTTGCACAC CATTACGCTG GCACGTTCGC GCTTATTGTG AACAGGCTGG TGGCTATCGT
GATTTTGTCT TAAGCCGCAT ACAAGGTATT CCTGACATCA ACAATAATGC GATACACGGT
AAACGTGACG ATGTACTTTG GAATACCAAA GTGAACGTAG AACTCATCCC CGATCTTCGC
CTAAATGAAA AACAACGCGC GGTGATAGAA AAAGATTATG CGATGAGTGA CGGCGTTTTG
CGAATTGCCA CCAACGCGTC ACTCGTTCGC TATGTGCTTG ATACCTATAA CATTGATATC
CATGTACAAA AATCTAATCC TCAAGGACAA CAGATTGTGC TGGGGAATCG GGATGAGCTT
ATATCCTACG TTTTGGAGTA G
 
Protein sequence
MSAWPIRWDL LFRYRMIEII ALWEGRLTTN HLIQSFGIGR QQASKDINTY LADIAPGNLV 
YDKHLKGYKP SDSFSPKLTS GHADEYLHIL SRSEDMTVTF NELDMGFEHS TMVRPVTRNI
SPQVLRPLVQ AIREKKRVDI CYTSLKDGEQ SERIISPHTL VCTPLRWHVR AYCEQAGGYR
DFVLSRIQGI PDINNNAIHG KRDDVLWNTK VNVELIPDLR LNEKQRAVIE KDYAMSDGVL
RIATNASLVR YVLDTYNIDI HVQKSNPQGQ QIVLGNRDEL ISYVLE