| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1365 |
|---|
| Symbol | |
|---|
| ID | 5136613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1463973 |
|---|
| End bp | 1465385 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640532823 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001217308 |
|---|
| Protein GI | 147675030 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1479] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTTG TTGTTGCCAG TTGCACACTG GATAAGCTGT TTTCTAATGA GTCGATTTTA
GCTTCTGACG GTAAAGTTCA AAAAAACGTT CACGGGATGC TTGCCATCCC TGAATATCAG
CGTCCCTATC GCTGGAATGA AGAGCAAATC ACCCGTCTAT TGAAAGATTT CAAGCTTCAT
CAGCAAGAGT TAAATGACAA GCTTGAAACA GAGCATTGCC CATTCTATTT AGGTAGTGTG
ATTCTGCATC AGCAGGGTGA CAAGCTGAAT ATCATCGATG GTCAGCAACG TTTGACCACA
ATGGCGTTGA TGTCTTATCT AGCAAATAAA CATGTCGATC TTAAACTAGT TTACGAATCG
CCTGAGAGTC AGCAGCAAAT CAAACACAAT CTTGGTTGGT TGTATAGAAA TGAAGCCTCT
TTGGCTGATA TCGATTTTGC TCAAATCAAT ATTACCTTGG TGGTGACAGA CAGTGAAGAT
GAAGCCTACC GCTTTTTTGA AACCCAAAAC ACGGGCGGCG TGCGATTAGC CGGGCCAGAT
ATTATTAAAG CGCACCATCT TAGAGCGGTT GATGAGAAAG ATAAGTCTGC GGTAAACACC
TTTGCCACAC GTTGGGAAGC GCTGGGGGAT TTAAACCCCG TGGTCGATAT TTTGCTACGT
GGTCGCTATT GGCAATATCT GAACTTCCGA GACTACCCGC TGCACAACCA AACTCAGCAA
GTGCGAAATA GTATTGTCAC CGAACTGGCA GAGCACACAG GCAAAGGCGA CGATATTGCC
TTTGGTAGAA TTGCTCGTAC TTATATGCCC AACGGTGGAG AGAGCTTGGC ACAGCCTCAA
GTTGGCTATG AATTGCGCCA GCCGCTAAAC AGTGGCGCTA ATACCATTCA CTATTTGCAA
TATTTTGAGC AACTGCGCCA AACCTATTTG CTGAAAAACT CAACGCAAGG TGAGCTTGCA
GGCTTTTACG AGTTCTATCA AAAGCTGGTG TGTAAACTTG ATGGCTGCGG CTATCTCAAA
CAGCTTTATG ACGCTTGCCT GCTGCTCTAC ATCAGTCAGC ATGGGCAGCA AAGCCTAGAG
GTAGCAGCGA AAAAACTTTT CCGCGTGGTT TACTCTCGAC GTGTAGAGAA CCAAAAAGCA
GTAAAAGAGA AATCGGTTCC TGCTTTTGTC AAAGAAACCC CAGTGCTGGA TTGGATTGCG
ATGAGCTATA CCCCAGAGCA GTGTTTCGCA CAGCTTGATG GTTTTAAGCT GTCGGTAGAC
AAGAGTGGCT TTGATAAAAA CAGCGTTAAA AAACGTTTCG TCGAAAAAGT GTCTCAATAC
TTTGGCCTTG ATATAGACAA GCAAGATTAT GCCAATCAAT TTGGCCCTGC ATTTAGCCAA
CACATCTCTG CGTTAGGAGC AAAACATGGG TGA
|
|---|
| Protein sequence | MAVVVASCTL DKLFSNESIL ASDGKVQKNV HGMLAIPEYQ RPYRWNEEQI TRLLKDFKLH
QQELNDKLET EHCPFYLGSV ILHQQGDKLN IIDGQQRLTT MALMSYLANK HVDLKLVYES
PESQQQIKHN LGWLYRNEAS LADIDFAQIN ITLVVTDSED EAYRFFETQN TGGVRLAGPD
IIKAHHLRAV DEKDKSAVNT FATRWEALGD LNPVVDILLR GRYWQYLNFR DYPLHNQTQQ
VRNSIVTELA EHTGKGDDIA FGRIARTYMP NGGESLAQPQ VGYELRQPLN SGANTIHYLQ
YFEQLRQTYL LKNSTQGELA GFYEFYQKLV CKLDGCGYLK QLYDACLLLY ISQHGQQSLE
VAAKKLFRVV YSRRVENQKA VKEKSVPAFV KETPVLDWIA MSYTPEQCFA QLDGFKLSVD
KSGFDKNSVK KRFVEKVSQY FGLDIDKQDY ANQFGPAFSQ HISALGAKHG
|
|---|
| |