| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1352 |
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| Symbol | pqiB |
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| ID | 5135330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1442015 |
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| End bp | 1443658 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640532810 |
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| Product | paraquat-inducible protein B |
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| Protein accession | YP_001217296 |
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| Protein GI | 147675648 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000273869 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAC TGTCTATGAG TGATGAACCT CAAGTTAATG CTGAAATAAC TGCGCAAAAG
CAGCTCTCTG CAATTTGGAT CATTCCTATT CTGGCTCTTG CGATGGGGTT ATGGATGTTA
TTTCAGTACG TCAATAGCAC GGGTCCCAAG ATAACGCTCA TCTTACCGAC AGCTGATGGG
CTCGAAGTAG GGAAAACCCA AATTAAAGCC CTTAATGTCA ATGTTGGGGT AATAACTGAG
ATAAAACTCA GCGAAGATTA CGATCACATT GTGGCAACGG CGCAAATGAG CAAAGATGCC
GATCGCATGT TGCGCGAAGA TACGCTCTTT TGGGTAGTAA AACCTCGCAT TGGCCGAGAA
GGCATTTCTG GTCTCGATAC CTTACTTTCT GGCGCTTATA TTCAGCTCCA ACCGGGAACC
GCTTCGAGTG CTCAAGACCA TTTTAAGGTC ATGGACTTAC CACCGATTGC ACCGCCTGAT
GCTAAAGGGT TGCGTTTAGT GCTCACGAAT AAAGAAGCCG GAAAACTCAA CGTGGGCGAT
CCAGTCATGT ATGAAGGATT CACCGTCGGC CGAGTGGAGA GTGCCCAGTT TGATGTGGAA
AGCAAAAAGG CTCAGTACCA ACTCTTTATC TTTGCCCCTT ACGATAAATT GGTGAATACA
CGCTCCTTCT TCTGGCTCAA TTCCGGGATC AACCTTCAAC TGAATGCCGA AGGGCTTGAG
TTCAGCTTAG GGTCGATAGA AAGCCTACTC AAAGGCGGAG TCACTTTTGG CCAGTTACAA
GAAGAGGATT CTGGCCAGCC GATTACTCAG CAGCTGACCG AGTTTCGCTT GTTTGATGAT
GTAAAACAGA TCCGTGAAGG CATGTTTGAT GACTACATCG AGTTTGTGAT GATGTTTGAT
GAATCGGTAC GCGGGCTCAA ACCTTCCGCT CCGGTCGAAT ATCGTGGTCT ACGTATCGGT
ACGGTCAGCA AAGTACCTCT GCGTACTCGT ACCTCAAACA TTGATATCAG TACTAATCGT
ATCCCCGTCC TAGTGCGAAT TGAGCTAGGT CGTTTGTACG ATAATTTTAA TAAAGCCGAT
CTCCCCGCAT TGAAGTCACG TATGCAACAG GAGTTTTTCA AAGGGCTCAA AGCCTCGTTA
AAAACCGGCA ACTTAGTGAC TGGCGCTTTG TACATTGATA CCGATTATTA CCCAGAAGAA
AAAATAGATG GCTTGAAACA CTTCGATGGG TATCCCCTAT TCCCCACCAA ACAAGGTGGA
TTTGCTGAAG TGCAAAAACA AGTTACCGAA TTGCTGAGAA AACTCAACGG GTTGCCTATG
GATGATACTT TGGCATCACT CAACAGCACG TTAAAAACCT CAGAAGCGCT GTTGGCTTCG
GCAGAACGCA TTCTCAAAAA ACAAGAGACA CAAAATCTGC CAGCGGATAT TCAAGCAAGC
CTAAAGCAAC TGGAAACGAC CCTAGGTGGT TTTGGTCCTG AGTCGACGGT GTATCGTGAG
CTTGAAACCA CGTTAAGAGA ACTCAACCAA GTGATGGCCG AATTTAAACC TGTGCTGCGC
ACCATTAATG AAAAACCTAA TGCCTTGATT TTTGGTGAAA GTAATACAGC AGATCCGATT
CCCGCGAAAG GAAAGCAAGA ATGA
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| Protein sequence | MRKLSMSDEP QVNAEITAQK QLSAIWIIPI LALAMGLWML FQYVNSTGPK ITLILPTADG
LEVGKTQIKA LNVNVGVITE IKLSEDYDHI VATAQMSKDA DRMLREDTLF WVVKPRIGRE
GISGLDTLLS GAYIQLQPGT ASSAQDHFKV MDLPPIAPPD AKGLRLVLTN KEAGKLNVGD
PVMYEGFTVG RVESAQFDVE SKKAQYQLFI FAPYDKLVNT RSFFWLNSGI NLQLNAEGLE
FSLGSIESLL KGGVTFGQLQ EEDSGQPITQ QLTEFRLFDD VKQIREGMFD DYIEFVMMFD
ESVRGLKPSA PVEYRGLRIG TVSKVPLRTR TSNIDISTNR IPVLVRIELG RLYDNFNKAD
LPALKSRMQQ EFFKGLKASL KTGNLVTGAL YIDTDYYPEE KIDGLKHFDG YPLFPTKQGG
FAEVQKQVTE LLRKLNGLPM DDTLASLNST LKTSEALLAS AERILKKQET QNLPADIQAS
LKQLETTLGG FGPESTVYRE LETTLRELNQ VMAEFKPVLR TINEKPNALI FGESNTADPI
PAKGKQE
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