Gene VC0395_A1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1339 
Symbol 
ID5137103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1427226 
End bp1428431 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content50% 
IMG OID640532797 
Producttrans-2-enoyl-CoA reductase 
Protein accessionYP_001217283 
Protein GI229259763 
COG category[S] Function unknown 
COG ID[COG3007] Uncharacterized paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.449883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATCA AACCTAAAAT TCGTGGATTT ATCTGTACAA CAACGCACCC AGTGGGTTGT 
GAAGCGAACG TAAAAGAACA AATTGCCTAC ACAAAAGCAC AAGGTCCGAT CAAAAACGCA
CCTAAGCGCG TGTTGGTTGT CGGATCGTCT AGCGGCTATG GTCTGTCATC ACGCATCGCT
GCGGCGTTTG GCGGTGGTGC GGCGACAATC GGCGTATTTT TCGAAAAGCC GGGCACTGAC
AAAAAACCAG GTACTGCGGG TTTCTACAAT GCAGCAGCGT TTGACAAGCT AGCGCATGAA
GCGGGCTTGT ACGCAAAAAG CCTGAACGGC GATGCGTTCT CGAACGAAGC GAAGCAAAAA
GCGATTGAGC TGATTAAGCA AGACCTCGGC CAGATTGATT TGGTGGTTTA CTCATTGGCT
TCTCCAGTAC GTAAGATGCC AGACACGGGT GAGCTAGTGC GCTCTGCACT GAAACCGATC
GGTGAAACGT ACACCTCTAC CGCGGTAGAT ACCAATAAAG ATGTGATCAT CGAAGCCAGT
GTTGAACCTG CGACCGAGCA AGAAATCGCT GACACTGTCA CCGTGATGGG CGGCCAAGAT
TGGGAACTGT GGATCCAAGC GCTGGAAGAG GCGGGTGTTC TTGCTGAAGG TTGCAAAACC
GTGGCGTACA GCTACATCGG TACTGAATTG ACTTGGCCAA TCTACTGGGA TGGCGCTCTA
GGCCGTGCCA AGATGGACCT AGATCGCGCA GCGACAGCGC TGAACGAAAA GCTGGCAGCG
AAAGGCGGTA CCGCGAACGT TGCAGTTTTG AAATCAGTGG TGACTCAAGC AAGCTCTGCG
ATTCCTGTGA TGCCGCTCTA CATCGCGATG GTGTTCAAGA AGATGCGTGA ACAGGGCGTG
CATGAAGGCT GTATGGAGCA GATTTACCGC ATGTTCAGTC AACGTCTGTA CAAAGAAGAT
GGTTCAGCGC CGGAAGTGGA TGATCACAAT CGTCTGCGTT TGGATGACTG GGAACTGCGT
GATGACATTC AGCAGCACTG CCGTGATCTA TGGCCACAAA TTACCACAGA GAACCTGCGT
GAGCTGACCG ATTACGACAT GTACAAAGAA GAGTTCATCA AGCTGTTTGG CTTTGGCATT
GAAGGCATTG ATTACGATGC TGACGTCAAT CCAGAAGTCG AATTTGATGT GATTGATATC
GAGTAA
 
Protein sequence
MIIKPKIRGF ICTTTHPVGC EANVKEQIAY TKAQGPIKNA PKRVLVVGSS SGYGLSSRIA 
AAFGGGAATI GVFFEKPGTD KKPGTAGFYN AAAFDKLAHE AGLYAKSLNG DAFSNEAKQK
AIELIKQDLG QIDLVVYSLA SPVRKMPDTG ELVRSALKPI GETYTSTAVD TNKDVIIEAS
VEPATEQEIA DTVTVMGGQD WELWIQALEE AGVLAEGCKT VAYSYIGTEL TWPIYWDGAL
GRAKMDLDRA ATALNEKLAA KGGTANVAVL KSVVTQASSA IPVMPLYIAM VFKKMREQGV
HEGCMEQIYR MFSQRLYKED GSAPEVDDHN RLRLDDWELR DDIQQHCRDL WPQITTENLR
ELTDYDMYKE EFIKLFGFGI EGIDYDADVN PEVEFDVIDI E