| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1337 |
|---|
| Symbol | |
|---|
| ID | 5135649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 1425919 |
|---|
| End bp | 1426620 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640532795 |
|---|
| Product | arginyl-tRNA-protein transferase |
|---|
| Protein accession | YP_001217281 |
|---|
| Protein GI | 147674038 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2935] Putative arginyl-tRNA:protein arginylyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0223511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCAG ATATTCAGCA AATTCGTATT GGCTTAACCA ATAACCATCC TTGTAGCTAC
TTAGCGGATC GGATGGAGCG CGTCGCCGTG GCGATTGATC CGCAGATGCA AACCCCCGAA
ACCTATGAAG TGCTGATGGC AAATGGTTTT CGGCGCAGCG GCGATACCAT CTACAAACCG
CATTGTGATC ATTGCCAGTC TTGCCAAGCT CTGCGAATTC CTGCGCCCGA TTTTGTGCCA
AGCAAAAGCC AAAAACGTTT ACTCAAGCTG CTCAGCCAAG AGTTTCATTG GCAGTTGAAA
CCAGAACTGG ATGAAGATTG GTACGCCCTT TACGCGCGTT ATATTTTCGC TCGTCATCGC
CACGGCTCCA TGTACCCACC CAATAAAATG GAATTTGCCA AATTTGCCCG TGCAAAATGG
CTTAATACCC AATATTTACA TCTTTATCAG GGCGAAAAGT TGGTCGCGAT TGCCGTCACC
GATTTACTCC CAAACAGTGC GAGTGCGTTT TACACCTTTT ATGACCCAGA TATTTCGATC
TCTTTAGGCA CCTTAGCGGT ACTTTGTCAG CTCAATTACT GCCAACAGAC CAAAAAGCAG
TGGCTTTATT TGGGATATCA AATCGATGAA TGCCCAGCTA TGAACTACAA AGTCCGGTTC
AATCCACATC AAAGGCTAGT AAATCAACGT TGGCGAGGGT AG
|
|---|
| Protein sequence | MSSDIQQIRI GLTNNHPCSY LADRMERVAV AIDPQMQTPE TYEVLMANGF RRSGDTIYKP
HCDHCQSCQA LRIPAPDFVP SKSQKRLLKL LSQEFHWQLK PELDEDWYAL YARYIFARHR
HGSMYPPNKM EFAKFARAKW LNTQYLHLYQ GEKLVAIAVT DLLPNSASAF YTFYDPDISI
SLGTLAVLCQ LNYCQQTKKQ WLYLGYQIDE CPAMNYKVRF NPHQRLVNQR WRG
|
|---|
| |