Gene VC0395_A1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1336 
Symbolaat 
ID5135257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1425184 
End bp1425915 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID640532794 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_001217280 
Protein GI147674281 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000472167 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTT ATCTGACTGA ATTATCGCCG GAAACGTTGA CATTCCCCTC TCCTTTTACT 
GCGTTAGATG ACCCTAACGG CCTGCTTGCA TTTGGCGGCG ATCTCCGTCC TGAACGAATT
TGGGCGGCTT ATCAACAAGG CATTTTCCCT TGGTATGGCC CTGAAGACCC GATTTTGTGG
TGGAGCCCTT CCCCACGTGC CGTGTTTGAC CCTACTCGGT TTCAACCTGC CAAAAGCGTG
AAGAAGTTCC AACGTAAACA TCAGTATCGG GTTAGCGTGA ATCACGCGAC GTCGCAAGTG
ATTGAGCAGT GCGCGCTCAC TCGCCCTGCG GATCAACGTT GGCTCAATGA CTCAATGCGC
CATGCGTATG GCGAGTTGGC GAAACAAGGT CGTTGCCATT CTGTTGAGGT GTGGCAGGGC
GAACAACTGG TGGGTGGGCT TTATGGCATT TCCGTTGGCC AACTGTTTTG TGGCGAATCC
ATGTTTAGCC TCGCAACCAA TGCCTCGAAA ATTGCGCTTT GGTATTTTTG CGACCATTTT
TCTCGCCATC AAGGGCAGTT GATTGATTGC CAAGTGATGA ATCCGCATTT GCAATCTTTA
GGCGCAACGA CCTTGAGCCG TGAACAATTT ATCCAATCGT TGCTATCTTT TAAGGAGAAG
CAGGTGCTCA GTGGCTGTTT TGAAACTCAG TGGCTCGCCA CCCCCACTTC GCCATGTGCC
TTTGAGGATT GA
 
Protein sequence
MTIYLTELSP ETLTFPSPFT ALDDPNGLLA FGGDLRPERI WAAYQQGIFP WYGPEDPILW 
WSPSPRAVFD PTRFQPAKSV KKFQRKHQYR VSVNHATSQV IEQCALTRPA DQRWLNDSMR
HAYGELAKQG RCHSVEVWQG EQLVGGLYGI SVGQLFCGES MFSLATNASK IALWYFCDHF
SRHQGQLIDC QVMNPHLQSL GATTLSREQF IQSLLSFKEK QVLSGCFETQ WLATPTSPCA
FED