| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1329 |
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| Symbol | glgA |
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| ID | 5136737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1416989 |
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| End bp | 1418443 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532787 |
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| Product | glycogen synthase |
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| Protein accession | YP_001217273 |
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| Protein GI | 147673151 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.147242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAT TCAACGTTTG GTTTACCGTT TCAGAAGTAC AGGGGCTGGT AAAAAGTGGT
GGCCTGGCCG ATGTGGCAAA AGCGCTGCCA CAAGCGTTGA AAGCGTTGCA TCAGCAGGTA
GCCATTGCGC TGCCTGCTTA TCGTTCAGTA CCGGGAAAGG AAGACGCAGA GTTAGTACTG
GAAACAGAGC TGACACACTG GCCGCACACG CAGTATCGTG TTTTAAAACG CGATCTAGAC
GGTGTGCCAA TCTATCTAAT TGATTGCCCT GCTTATTTTG ACCGCCCGGC GCTGTATGCT
GAGAATAATC AAGCCTATGC CGATAATGGT GAACGGTTTG GTTTTTTCTC TGCAGCGTGT
TTGGACGTAC TGCCGAAACT CGGTATTCAG CCTGACATCA TTCATGCGAA TGATTGGCAC
ACAGGCTTAG TGCCTTTTTT GTTGAAAACC CGTTATCGCT ATGACAGCTT TTTTGAGCAA
GTCAAAAGTG TGCTGACGGT GCATAACGCG ATTTTTAAAG GGATCTTTTC CTACCATCAG
TTAGAAGTCA TTCCTGAGCT CAATTTATCG GGTATGGAAT TTCTGCAATA CGGTCACGAT
CATGTGAGCA TGCTGCGGGC GGGGATCGCT TTTGCGGATA AAGTGAATGC GGTGAGTCCT
AATTATGCGG CTGAGCTTTT AACGCCTCTT GGGGCTCACG GGCTGGTGGA TGATTTTGTG
CGCCGAGCGC GCGATTTACA CGGTATCGTC AACGGTTGTG ATTACAGCGA GTGGAATCCA
AGAACCGACC ACTATCTGCC AGCAACCTAC AGCGATGAGC CTGAGTCGAT GCGCAAGGGG
AAAGCGCTGT GTAAAACGGC GCTGCAGGAA GAGTTACACC TGCCGGTTAC CGATGTACCT
CTGTTTGGTA TGGTTTGCCG TTTAACGCAT CAGAAAGGCT TTCATTACTT GTTGCCGATT
TTAGAGCAGT TCCTGCGCAA TAACGTTCAA GTGGTTATTG TTGGTACTGG TGAGCCGGAA
GTTGCTGCGC GGTTGAATAA GATCGCTCAT TATCATCGAG CCAAGTTTGC GTTTGTCGAA
ACCTACAGTG AGCGTTTAGC GCACTGGGTT GAAGCGGGAT CGGATTTCTT CTTAATGCCT
TCTGAATTTG AAGCCTGTGG GCTCAATCAG ATTTACAGCA TGGCTTATGG CACTCTGCCT
ATTGTTCGTG AAGTGGGTGG CTTGAAAGAT ACGGTGAACG ATTACGATAA ATTCCCGGAG
CGCGCGACAG GCTTTGGTTA CCAAGAGCCC ACGCCAGAAG CTCTATTGAT CACGATGCAG
CGGGCACTCT TGTTTTATCT GCAGCAGCCA GAAGAGATGC TGAAAGTGCA ACAACGTGCC
ATGCAGCAAA ACTTCAGTTG GGAAGAGTCT GCCCAAGAAT ATATGAAGAT GTATCGACTC
GCGCGATTTG GCTAA
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| Protein sequence | MEQFNVWFTV SEVQGLVKSG GLADVAKALP QALKALHQQV AIALPAYRSV PGKEDAELVL
ETELTHWPHT QYRVLKRDLD GVPIYLIDCP AYFDRPALYA ENNQAYADNG ERFGFFSAAC
LDVLPKLGIQ PDIIHANDWH TGLVPFLLKT RYRYDSFFEQ VKSVLTVHNA IFKGIFSYHQ
LEVIPELNLS GMEFLQYGHD HVSMLRAGIA FADKVNAVSP NYAAELLTPL GAHGLVDDFV
RRARDLHGIV NGCDYSEWNP RTDHYLPATY SDEPESMRKG KALCKTALQE ELHLPVTDVP
LFGMVCRLTH QKGFHYLLPI LEQFLRNNVQ VVIVGTGEPE VAARLNKIAH YHRAKFAFVE
TYSERLAHWV EAGSDFFLMP SEFEACGLNQ IYSMAYGTLP IVREVGGLKD TVNDYDKFPE
RATGFGYQEP TPEALLITMQ RALLFYLQQP EEMLKVQQRA MQQNFSWEES AQEYMKMYRL
ARFG
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