Gene VC0395_A1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1326 
Symbol 
ID5137136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp1414944 
End bp1415633 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content47% 
IMG OID640532784 
Producthypothetical protein 
Protein accessionYP_001217270 
Protein GI147674835 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0497167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAA AACTCATCAT CGCCATTGTT TTGATTGCCA TTGCCGCGCT CTTGGTGACG 
CAGTTTAGCC AATACCTCAC ACTGGATGTT GCGAAAGCCA AACAAGCCGA ATTAGCGAAT 
TATATTGATG CCCATTTGCT GCAAGCCGCA CTGATCTATT TTGTGGTGTA TGTTCTCCTA 
ACCGCATTTT CAATCCCCGG CGCAACGGTC GTGACTTTGT TGGGAGCGGC CCTATTTGGC 
TTTTGGTTGA GCTTACTGCT GGCTTCTTTT GCCAGTACCA TTGGTGCCAC TCTCGCCTTT 
CTCAGTAGCC GCTTCTTATT GCGAGATTGG GTGCAAGCTA AATTCGCTGA TAAATTGCAA 
ACCATCAATC AAGGTATTGA ACGAGATGGC GCGTTTTATT TACTCTCTCT GCGACTGATC 
CCGATTTTTC CATTTTTCCT GATTAACTTA GTGATGGGGC TAACGCCTAT CTCCACTTGG 
CGTTACTACT GGGTCAGCCA ACTTGGTATG CTGCCGGGTA CGGCGGTGTA TCTCAATGCG 
GGTACTCAAC TGGCGGAAAT CTCAAGCCTA GGCGAAATTG TGTCGCTCCC TGTGCTCGCT 
TCATTCGTTT TGTTAGGCGT ATTTCCGATA GTGGTGAAAT GGCTCATGGG TAAATTTCAA 
CAGCGTGCCA CTCAATCGCC AGTGAAGTAA
 
Protein sequence
MYKKLIIAIV LIAIAALLVT QFSQYLTLDV AKAKQAELAN YIDAHLLQAA LIYFVVYVLL 
TAFSIPGATV VTLLGAALFG FWLSLLLASF ASTIGATLAF LSSRFLLRDW VQAKFADKLQ 
TINQGIERDG AFYLLSLRLI PIFPFFLINL VMGLTPISTW RYYWVSQLGM LPGTAVYLNA 
GTQLAEISSL GEIVSLPVLA SFVLLGVFPI VVKWLMGKFQ QRATQSPVK