Gene VC0395_A1315 details

Gene Information

• Locus tag: VC0395_A1315
• ID: 5135259
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1401074
• End bp: 1401688
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640532773
• Product: hypothetical protein
• Protein accession: YP_001217259
• Protein GI: 147673222
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCATCTGA CATTAATCGA GAACATTGTT ATGGATTACA CCTTATTTGG GCCGCTGCTG 
GCGTTTGCTT TTGTGTCTAC TTTTTCGCCG GGGCCTAACA ACATCATGCT AATGACCTCA 
GGAGCCAATG TTGGTTTTCT GCGCACTATC CCGCACATGC TGGGGATTAC GTTTGGTTTT 
AGCATCATGG TATTGCTGGT GGGAGTGGGC TTGACGGAAC TGTTTCAGCG TTATCCGATC 
CTTCAACAAG GGTTACAAAT TCTCTGCACT CTGTATTTGG TGTATCTGGC GATCAAAATT 
GCTCTGAGCC GACCATCCAA AGATGGGCAA GAGTATCAGC CGATGTCTTT TGTGGCGGCG 
GCGCTGTTTC AGTGGGTGAA CCCCAAAGGT TGGTCAATGG CGCTCACGGT GGTGAGTGTG 
TTTAACCCTC ATGCGAGCTG GCTGCAGTTA GGTTTAATTG CGCTGGTTTT TGCGTTAGTG 
AATTTACCTT CAGTCAGTGT GTGGACTGCT GCAGGAAAGC AACTGAGCTA CTGGATGAAT 
CATCCCAATT ATGTGCGTTG GTTTAATGGA GCGATGGGGG GATTGTTACT GCTTTCGGTG 
GTACCGATGC TTTGA 

 

Protein sequence

MHLTLIENIV MDYTLFGPLL AFAFVSTFSP GPNNIMLMTS GANVGFLRTI PHMLGITFGF 
SIMVLLVGVG LTELFQRYPI LQQGLQILCT LYLVYLAIKI ALSRPSKDGQ EYQPMSFVAA 
ALFQWVNPKG WSMALTVVSV FNPHASWLQL GLIALVFALV NLPSVSVWTA AGKQLSYWMN 
HPNYVRWFNG AMGGLLLLSV VPML