| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1312 |
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| Symbol | |
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| ID | 5137667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1392951 |
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| End bp | 1395719 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532770 |
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| Product | zinc protease |
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| Protein accession | YP_001217256 |
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| Protein GI | 147675340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.792091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC GATTATTAGT CAGCATTTTA TGCATACTGT TCGCCGGTTG CGCCTTACAA
CAAACCAACC GCGCACTCCA ACCCGATCAA CGCTGGGTTA CTCAAACACT GCCCAATGGC
CTTACTTACC ATCTCTACCC AGACAGTGAA CAAGAAGTCT CTATTCGTTT GTACGTTCAC
GCAGGTTCAA TGCAAGAAAC CACGCAGCAA GCGGGTTACG CTCACTTCAT CGAACATATG
GCATTTAACG GAACCCGCCA TTATCAGCAC AATGATGTGA TTCGTATGTT TGAGCAAAGT
GGTGCCCAGT TTGGTGCGGA CTTTAACGCT TTAACCGGCT ACGACCGCAC GGTTTATCAG
CTCGACCTAC CTAATGCGCA AAATATCGAT AAAGCGCTAT TGTGGTTTGC TGATATTGCT
GACGGTTTAG CGTTTGACGC TGATGAAGTC GAAAAAGAGA AAGGGGTGAT TTTGGGGGAG
TTTCGCGCCT CACGCACAGA AAACATGAGC TTAGAGCAGC AGTTTTATCT GCACCAGATC
CAAGGAACCT CCTACGCGGA TCGCGATCCC CTCGGTTCAC GCGAGTTGGT GCAAGCCGCC
ACTCCAGACA GTTTGAAAGC CTTCTACCAA CAGTGGTATC AACCTCAATT AGCGGAACTG
GTCATTACTG GTAACTTTAC CCTTGAACAA GGCCAACAGT GGGTTGAGAA CTATTTCTCC
TCATGGAAGA AAGGCACCAC CGAAAAGCCA GCTTCGATTT ATCACCAAGC CCTGAATAAC
CAAGACCTAG TCGCTCCGGT GACTGCAGGT GAATCCCCTA GCCTAACCTT GATCTTCCCC
CAAGGCTCAG CAGCGATTAA AGACTATGCC AGCCAGCAAG AGTTTTGGCG CGACGATGTC
GGCGAACAAC TCCTGCACAC ACGCCTAGTA GCGGCATTCA ATGATGCAGC GCAGGCCATA
ACCGGCATTT ACGCAACCCA TTATGAAATC GAAGGTCAAC GTTACACTCT CATTAGCGTC
GGGTTTGCGG CCGAACAACG AGAGAAAGTG CAAGCCTTGT TGCTGGAAAC CCTCGCTTCA
ATGCGTGATT ACGGGGTGAC CAAAAATGAG TTGGATATCA TTTTGCGCGG TTATCGTGAG
CACTTAACCT TTTTGCAAGA AGATCGCGAA GCCATAACCC CAGCGAGCCA TGCCAATCAA
AAAGTCTACT CGATTGTGTT TGATACACCG ATCCAAGCGA CGCTCGATTA CCAAGCGAGC
TTGAGCGAGT TTATTGCTTC CGCGACACCA GAAATGATCA ATCGTCATAT CCAACAGCAA
TTGAGCCAAA ACCCTGTCTG GGTTGTTGGC GTTGCGGCCA CTGAAGATGC GCAAGCGTTG
AACAAAGCCT TGCCACAATG GCGTAACGAC CTAGCGCAAC CTGGCAATCA GCCTATCGAT
CAACAAATCG ATAGCCCATT CACCCAGCAA TTTACTGCGG GCGAAGTGGT GAAACAACTC
GATATCAATG ACGATCCACA GGTGACTTAT TGGCAGCTTG ATAACGGTAT TGATGTCTAT
TATCTGCGCA ATATTGAAGC CAAAGATCGC GTCTTTGTTC AATACGCCAG TTCGGGTGGC
CAATTCGCGT TACCTGCAGA CCTACTCCCT GCAGCCGAGA TTGCTACTGC AGTACAGACA
CGAAGTGGCC TCGATACGTT GAACGGCTCT CAGTTTGATC GCTACCTTCG TCAGAAAGAC
ATTGGTTTCT ATAGCTATAT TGCATCGACC AGTCATGGTT TCGAAGCCAA TAGTAAAGCG
CAAGAGTTAC CTGAGCTGTT GGAAATACTC CATTTATTGT CAACTCAAGT CAAAGTCAGC
CCTGATCAGC TCAATTCAGT GAAAACCGAA TTTACTCAAA ATCGTAGTGC GTACTTTGAT
TCCCCTATTG GCGCTTTCTT CCGTACGGTG ACCAACCAAA GCTTTATCGA AACAAGTCCC
TACAGAATTC GTACTCCAGA GCAGATTGCT CAAGTCACGG CACAGCAAAT TGAGCAGGTT
CATCAGCGTC TCTTCAGTGA AGGACGCAAT AATACGCTGG TCATCGTCGG TGATATTGAG
CGGTCTCAAA TAACCCCGAT GTTGCGTCAG TACGTAGCAA GTATACCTTT GAGCAAGGGA
ACGCTTTCCC CTATGACCAG CCAGTTGATC AAACCGGTTG CGCCACGCTT AGAGTTAGCA
CTTAACAATG AAAACTCGAC CCAGTATTCC CTGCGCCTGA TATCTGAAAC GCAGCCGCGT
ACCGCAAAAA CCGTCTTTAT CGATGATATG TTGCAGCGTA TTGCGACTCA GCGTTTACTG
GCTGAAGTTC GCGAGCATCA AGGTTTAGAC TACACGCCAC AAGTGATCCC ATACGTGGTC
GATGGAGACA TTCTCAATGA TTGGGTATTG TCAGCTTTAG TCGACCCCAA AAGTGAACCA
CAAGTGGCCA AAGTGATGCA TGAGGTCGCG CGTGAGCTGG CTCAAGGTGT CACACAGCAA
GAGTTGGATG TGGTGAAACA GAAGTTCTTG ATTGATATGA AACCGCTCAA CAAATCACCG
GAGCAGCAAG CTTACTTCAT GTTGCGTTAT GCGATTCATC ACTATGGCGT TGAGACCATC
TACAAGGTTG AGGAGCTGAC GAAATCCATC ACTCTGGATG ACATCAACCA ACGTGCTCAA
ACGTTATTTG GCAAAGATAC TATGTCACAA GAGCTGATCA TGACACCTAA GGCTAATCCT
AAAGGCTAA
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| Protein sequence | MKIRLLVSIL CILFAGCALQ QTNRALQPDQ RWVTQTLPNG LTYHLYPDSE QEVSIRLYVH
AGSMQETTQQ AGYAHFIEHM AFNGTRHYQH NDVIRMFEQS GAQFGADFNA LTGYDRTVYQ
LDLPNAQNID KALLWFADIA DGLAFDADEV EKEKGVILGE FRASRTENMS LEQQFYLHQI
QGTSYADRDP LGSRELVQAA TPDSLKAFYQ QWYQPQLAEL VITGNFTLEQ GQQWVENYFS
SWKKGTTEKP ASIYHQALNN QDLVAPVTAG ESPSLTLIFP QGSAAIKDYA SQQEFWRDDV
GEQLLHTRLV AAFNDAAQAI TGIYATHYEI EGQRYTLISV GFAAEQREKV QALLLETLAS
MRDYGVTKNE LDIILRGYRE HLTFLQEDRE AITPASHANQ KVYSIVFDTP IQATLDYQAS
LSEFIASATP EMINRHIQQQ LSQNPVWVVG VAATEDAQAL NKALPQWRND LAQPGNQPID
QQIDSPFTQQ FTAGEVVKQL DINDDPQVTY WQLDNGIDVY YLRNIEAKDR VFVQYASSGG
QFALPADLLP AAEIATAVQT RSGLDTLNGS QFDRYLRQKD IGFYSYIAST SHGFEANSKA
QELPELLEIL HLLSTQVKVS PDQLNSVKTE FTQNRSAYFD SPIGAFFRTV TNQSFIETSP
YRIRTPEQIA QVTAQQIEQV HQRLFSEGRN NTLVIVGDIE RSQITPMLRQ YVASIPLSKG
TLSPMTSQLI KPVAPRLELA LNNENSTQYS LRLISETQPR TAKTVFIDDM LQRIATQRLL
AEVREHQGLD YTPQVIPYVV DGDILNDWVL SALVDPKSEP QVAKVMHEVA RELAQGVTQQ
ELDVVKQKFL IDMKPLNKSP EQQAYFMLRY AIHHYGVETI YKVEELTKSI TLDDINQRAQ
TLFGKDTMSQ ELIMTPKANP KG
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