Gene VC0395_A1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1306 
Symbol 
ID5136218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1387273 
End bp1387569 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content50% 
IMG OID640532764 
ProductYciI-like protein 
Protein accessionYP_001217250 
Protein GI147673552 
COG category[S] Function unknown 
COG ID[COG2350] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000114962 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTATG TGATTTTTGC GCAGGATGTC GAGAACTCAT TAGAAAAACG TCTGAGCGTG 
CGCCCAAAAC ATCTGGAGCG TTTACAACAA CTGCAAGATG AAGGCCGTCT GCTCACTGCA
GGCCCTATGC CAGCCATCGA TTCCGAAAAT CCGGGACAGG CAGGCTTTAC TGGCTCAACC
GTGATCGCGG AGTTCGCCTC CTTAGTTGAA GCACAAGCTT GGGCGGATGC CGATCCTTAT
GTCGCCGCGG GTGTTTATGC CAACGTCATT GTTAAACCTT TCAAAAAAGT ATTCTGA
 
Protein sequence
MWYVIFAQDV ENSLEKRLSV RPKHLERLQQ LQDEGRLLTA GPMPAIDSEN PGQAGFTGST 
VIAEFASLVE AQAWADADPY VAAGVYANVI VKPFKKVF