Gene VC0395_A1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1305 
Symbol 
ID5136887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1386758 
End bp1387198 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content49% 
IMG OID640532763 
Producthypothetical protein 
Protein accessionYP_001217249 
Protein GI147675608 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000164666 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTGCTG TGGATCCCCA AATGAATCAA ACCGTAAATT CACCTAAAGG CCAGCTTCTG 
CTGCGCACAC TCGCAATGCC TGCCGATACG AATGCAAATG GCGATATCTT TGGCGGCTGG
ATCATGTCTC AACTCGACTT AGCGGGCGGT ATTCTCGCTA AAGAGATCTC CTGTGGACGC
ATCGTGACTG TTTCTGTTTC CAGTATCACT TTTAAAAAAC CTGTCAAAGT CGGTGACGTG
GTATGTTGCT ACGGCGAATG CACCAAGATT GGCCGCACAT CGATGTCGAT CAATCTCGAA
GTGTGGGTTA AGCCGGTCAA AGAAGAAGGG GTCGGCGAAC GTTTTCAAGT GTGTGAAGCC
ACCTTTAACT ATGTGGCGAT TGATGCAAAT GGCCGCCCCA GAGCAATAAG CCTCAGCAAT
GGATCACAGA AATCATCTTG A
 
Protein sequence
MFAVDPQMNQ TVNSPKGQLL LRTLAMPADT NANGDIFGGW IMSQLDLAGG ILAKEISCGR 
IVTVSVSSIT FKKPVKVGDV VCCYGECTKI GRTSMSINLE VWVKPVKEEG VGERFQVCEA
TFNYVAIDAN GRPRAISLSN GSQKSS