Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1305 |
Symbol | |
ID | 5136887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1386758 |
End bp | 1387198 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640532763 |
Product | hypothetical protein |
Protein accession | YP_001217249 |
Protein GI | 147675608 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000164666 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTGCTG TGGATCCCCA AATGAATCAA ACCGTAAATT CACCTAAAGG CCAGCTTCTG CTGCGCACAC TCGCAATGCC TGCCGATACG AATGCAAATG GCGATATCTT TGGCGGCTGG ATCATGTCTC AACTCGACTT AGCGGGCGGT ATTCTCGCTA AAGAGATCTC CTGTGGACGC ATCGTGACTG TTTCTGTTTC CAGTATCACT TTTAAAAAAC CTGTCAAAGT CGGTGACGTG GTATGTTGCT ACGGCGAATG CACCAAGATT GGCCGCACAT CGATGTCGAT CAATCTCGAA GTGTGGGTTA AGCCGGTCAA AGAAGAAGGG GTCGGCGAAC GTTTTCAAGT GTGTGAAGCC ACCTTTAACT ATGTGGCGAT TGATGCAAAT GGCCGCCCCA GAGCAATAAG CCTCAGCAAT GGATCACAGA AATCATCTTG A
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Protein sequence | MFAVDPQMNQ TVNSPKGQLL LRTLAMPADT NANGDIFGGW IMSQLDLAGG ILAKEISCGR IVTVSVSSIT FKKPVKVGDV VCCYGECTKI GRTSMSINLE VWVKPVKEEG VGERFQVCEA TFNYVAIDAN GRPRAISLSN GSQKSS
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