| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1301 |
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| Symbol | |
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| ID | 5135401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1383949 |
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| End bp | 1384779 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532759 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217245 |
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| Protein GI | 147675295 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.47539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAG TTGTCGTGAT AGGTGCAGGA TGGCTAGGTT TGCCACTGGC ACAATGGCTT
AAGCAACAAG GCCATATTGT GTATGCGACA CGCACTACCC CACAGGCTGT TCAAACTCTT
GAAGATCAAG GTATTGAGAG TTTTGTTTGC CAATTAGACC AACCCGATGG CTTAAGCGAT
GCTTTGCTTG AGCGGCAATG CGATACCGTC ATTGGCTGCT TTCCTCCCGG TTTTCGTCAA
GGCGCTGGCG AGCACTATGC CAAACATTGG CAAAACTTGG TGCAGCATGC CAAACAGGCC
AATATTCAAA AACTGGTGAT GATCAGTTCA ACCTCTGTGT ATCCCGATAT CGCCAAAACG
ATGAATGAAC AAGACGCCTC TTTGGCATTG GCACTGGATA ATTCCGCTTT TGATGCGAAA
GCGCGCATCT TACTCAAAGC CGAACAGTAT GTGATCACCT CAGGTATGGA TTACACCATT
CTGCGTTGCA GTGGCCTGAT GGGGCCTAAA CGCCACCCAT CACGCTTTGT CAGCAAAATG
GCACAAGTCA GCCGACTCGC GCCAGCCAAT ATGCTGCATC TGTATGACGC GATTGGTATC
GCTCATTTTT CGATAGAGCA GCTCCCCTAC TCGATTATCA ACGCCACAAC CCCCAACACG
GTCAGTAAAG CGGAGTTTTA TCAGGCCGCA CTCGACGCAG TAGCAAGCGA CCTGCCTCTG
CCACCGCTGT GTGATAAAGA GGAGAAACGG ATTGTGTGCG ACAAATTATT GGCAGCTGGT
TACCGTTTTC ATTTCTCTCA CACCTTAGAG GCTGTGCACG GTTATGAGTA A
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| Protein sequence | MKRVVVIGAG WLGLPLAQWL KQQGHIVYAT RTTPQAVQTL EDQGIESFVC QLDQPDGLSD
ALLERQCDTV IGCFPPGFRQ GAGEHYAKHW QNLVQHAKQA NIQKLVMISS TSVYPDIAKT
MNEQDASLAL ALDNSAFDAK ARILLKAEQY VITSGMDYTI LRCSGLMGPK RHPSRFVSKM
AQVSRLAPAN MLHLYDAIGI AHFSIEQLPY SIINATTPNT VSKAEFYQAA LDAVASDLPL
PPLCDKEEKR IVCDKLLAAG YRFHFSHTLE AVHGYE
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