| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1299 |
|---|
| Symbol | |
|---|
| ID | 5137677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1382418 |
|---|
| End bp | 1383329 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640532757 |
|---|
| Product | putative formate transporter 1 |
|---|
| Protein accession | YP_001217243 |
|---|
| Protein GI | 147673760 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2116] Formate/nitrite family of transporters |
|---|
| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACTCAA GGGGAAATAG AGCGATTATC CGCCACCTCT TCTGTTGTGT GTCAAAATGT
AACAAGCTCA TGGAACATAA CCAATTCGAT TCTCTTCTCC CACCCCAGAT GGCAGAACGT
GCCGCCATTA CGGGTGAAGG TAAAGCTAAA AAAGCGGCGT ACAAATCTTT CCTGTTGGCG
ATTTCTGCTG GCATCCAAAT CGGTATTGCC TTTGTTTTTT ATACCGTAGT CACGACTGGT
GCTCACGATA TGCCTTACGG GGTGACTAAG CTGCTCGGCG GCTTAGCTTT TAGCTTAGGT
TTAATCCTAG TCGTCATTAC TGGCGGTGAG CTGTTTACCA GCTCAGTGTT GATTTTGGTG
GCGAAAGCGA GTGGTAAAAT TTCGTGGAAA GAGCTGGTTC GCAACTGGAC GGTGGTCTAC
TTCGGTAACT TATGTGGTTC GATTATCTTA GTGTTTATCA TGCTCGCCAC CCGTCAGTTT
ATGGAAGATG GTGGTCAGCT TGGCTTAAAT GCGATGGCGA TTTCCCAGCA CAAATTGCAT
CACACCTTCT TGCAAGCTTT CGCGCTTGGA TTGATGTGTA ACATCCTAGT TTGTTTGGCG
GTTTGGATGA CCTTTAGTGC CCGCTCGTTA ACTGATAAAG TGATGGTCTT GATCCTGCCG
GTGGCCATGT TTGTCTCTTC CGGTTTTGAG CACTGTATTG CCAATATGTT CCAAGTACCG
ATGGCGATTG GGATTAAGTA TTTTGCGCCA GAGAGTTTTT GGGCAATGAC AGGAGCGAAT
ATCGCTCAGT ACGCAGATCT CAACTTTGTT AACTTCATCG TCAATAACCT CATTCCAGTG
ACCTTAGGCA ATATTGTTGG TGGCGGTGTG TTTGTTGGCA TGTGGTACTG GCTGATCTAT
CTAAAAGATT AA
|
|---|
| Protein sequence | MNSRGNRAII RHLFCCVSKC NKLMEHNQFD SLLPPQMAER AAITGEGKAK KAAYKSFLLA
ISAGIQIGIA FVFYTVVTTG AHDMPYGVTK LLGGLAFSLG LILVVITGGE LFTSSVLILV
AKASGKISWK ELVRNWTVVY FGNLCGSIIL VFIMLATRQF MEDGGQLGLN AMAISQHKLH
HTFLQAFALG LMCNILVCLA VWMTFSARSL TDKVMVLILP VAMFVSSGFE HCIANMFQVP
MAIGIKYFAP ESFWAMTGAN IAQYADLNFV NFIVNNLIPV TLGNIVGGGV FVGMWYWLIY
LKD
|
|---|
| |