| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1296 |
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| Symbol | torA |
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| ID | 5135411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1377839 |
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| End bp | 1380301 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532754 |
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| Product | trimethylamine-N-oxide reductase |
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| Protein accession | YP_001217240 |
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| Protein GI | 147675496 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATTA CACGAAGAAG TTTTCTGAAA GGTGTCGCAA CCACCAGTGC GGCATCGATC
ATTGGCCCAA GCCTACTGAC CTCAGTTTCT GCCCAAGCGG CAGAAACCAC GGGAACTTGG
AAAGTCTCCG GTTCTCACTG GGGCGCATTC CGCGCCCACA TCTACGGCGG AAAGGTACAA
GAGCTGAAAG CGTTGGAGTT GGATACCCAC CCAACGGAAA TGTTGAACGG CATTCAAGGC
ATTCTGTACA GCCCATCTCG CGTGCGTTAC CCAATGGTGC GCCTCGATTG GTTGAAAAAA
CACAAATACA GTGCAGAAAC GCGCGGTAAC AACCGTTTTA TCCGTGTGAC TTGGGATGAG
GCGATTGACC TATTCTACCG TGAATTAGAG CGTGTGCAGA AGCAATACGG CCCTTGGGCA
CTGCACGCAG GCCAAACCGG TTGGAACCAA ACCGGTGCTT TCCACAACTG TACCGCGATG
ATGCAACGCG CGGTGGGTAT GCACGGTAAC TACATCACCA AAGTCGGGGA TTACTCGACT
GGTGCTGGTC AAACCATCAT GCCTTACGTA CTGGGTTCAA CCGAAGTTTA CGCGCAAGGT
ACCTCTTGGA GCGAGATTTT AGACAACTCA GACAACATCA TTCTGTGGGC AAACGATCCG
GTGAAAAACC TGCAAGTGGG TTGGAACTGT GAAACGCACC AGTCTTTCGG CTATCTGGAT
CAACTGAAAG AGAAAGTCGC AAAAGGCGAG ATCAACGTGG TTTCTGTTGA CCCAGTGAAA
AACAAAACGC AGCGTTTCTT ACAAAACGAT CACTTGTACA TCAACCCACA AACTGACGTG
GCGTTTATGC TGGCGCTCGC GCATGTGTTG TATACCGAAA ATCTGTACGA CAAGAAGTTC
ATTGAAACTT ACTGCTTGGG ATTTGAAGAG TTCATCCCTT ACGTACTGGG TAAGAGCAAA
GATAAGGTTG AAAAAACGCC TGAGTGGGCA GCGACAATCT GTGGCGTGAA ACCCGATGCG
ATCCGCGATT TCGCCCGTAT GTTGGTCAAT GGTCGTACTC AGCTGCTGTT TGGTTGGTGT
ATCCAACGTC AAGAGCACGG GGAGCAGCCG TACTGGATGG GCGCGGTACT GGCGGCCATG
ATCGGTCAAA TCGGTCTGCC GGGTGGCGGT ATCTCTTATG GTCACCACTA TTCAGGCATC
GGCGTACCTT CAACGGGGTT TGCGGGTCCT GGCGGCTTCC CACGTAACCT TGACCAAGGT
GCGAAGCCGA AGTGGGATAA CAATGACTTC AACGGTTACA GCCGCACGAT TCCGGTTGCT
CGCTGGATTG ATGCGATTCT CGAACCGGGT AAGAAGATCA ACCACAACGG AAATACAGTC
ACGCTGCCCG GTTTCAAGAT GATGGTGATT TCGGGTTGTA ACCCTTGGCA CCACCATCAA
GACCGCAACA AAATGAAGCG TGCGTTCCAG AAACTGGAGA CTGTGGTGAC GATTGATTTC
AGTTGGACGG CAACCTGCCG CTTTTCTGAC ATCGTACTGC CTGCTTGCAC CCAGTGGGAA
CGTAACGACA TCGACTCTTA CGGTTCCTAC TCAGGTAAAG GCCTGATTGC GATGCATCGT
TTGGTTGACC CGCTGTTCCA GTCACGTACT GACTTTGAAA TCATGACCGA GCTGACCCGT
CGCTTTGGCC GTGAAAAAGA GTACACCCGT GGCATGGATG AGATGGAGTG GGTACGTTCA
CTTTATGACG AGTGTAAGAA AGCCAACGAA GGTAAATTTG CCATGCCAGA ATTCGAAGAG
TTCTGGGAAA AAGGCTTCCT TGATTTTGGT ACAGGCACAC CTTGGGTTCG TCATGCGGAT
TTCCGCAAAG ATCCTGAAAT CAATGCATTG GGTACGCCTT CTGGTTTTAT CGAAATTACG
TCACGTAAGA TCGGTCGCTA CGGTTATGAA CACTGCCAAG AACACCCAAT GTGGTTTGAG
AAAACCGAAC GTTCACACGG GGGGCCGGGC TCTGACAAAT ATCCGTTCTG GTTACAATCA
TGCCACCCAG ATAAGCGTCT GCACTCACAA ATGTGTGAAG CCGAAGCATT CCGCGCGACT
TACGCAGTGC AGGGGCGTGA GCCAGTGTAC ATCAACCCAG TGGATGCGAA AGCCAAAGGC
ATTAAAGATG GCGATCTGGT GCGCGTATTC AACGACCGTG GTCAGTTATT GGCGGGAGCG
GTGCTGAGTG ACAGCTATCC ACGTGGCGTG ATCCGCATTG AAGAGGGGGC TTGGTATGGC
CCATTGACAG AGAAAGTTGG GGCGATCTGT ACTTACGGCG ATCCCAATAC TCTGACTCTG
GATCTGGGAA CGTCAGAGCT GGCGCAAGCC ACTTCTGCCA ATACCTGTAT CGTTGATTTT
GAGAAATTCC GTGGTGAAGT ACCTCCTGTA ACTTCATTCG GTGGCCCAAT CGAAGTCATC
TAG
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| Protein sequence | MAITRRSFLK GVATTSAASI IGPSLLTSVS AQAAETTGTW KVSGSHWGAF RAHIYGGKVQ
ELKALELDTH PTEMLNGIQG ILYSPSRVRY PMVRLDWLKK HKYSAETRGN NRFIRVTWDE
AIDLFYRELE RVQKQYGPWA LHAGQTGWNQ TGAFHNCTAM MQRAVGMHGN YITKVGDYST
GAGQTIMPYV LGSTEVYAQG TSWSEILDNS DNIILWANDP VKNLQVGWNC ETHQSFGYLD
QLKEKVAKGE INVVSVDPVK NKTQRFLQND HLYINPQTDV AFMLALAHVL YTENLYDKKF
IETYCLGFEE FIPYVLGKSK DKVEKTPEWA ATICGVKPDA IRDFARMLVN GRTQLLFGWC
IQRQEHGEQP YWMGAVLAAM IGQIGLPGGG ISYGHHYSGI GVPSTGFAGP GGFPRNLDQG
AKPKWDNNDF NGYSRTIPVA RWIDAILEPG KKINHNGNTV TLPGFKMMVI SGCNPWHHHQ
DRNKMKRAFQ KLETVVTIDF SWTATCRFSD IVLPACTQWE RNDIDSYGSY SGKGLIAMHR
LVDPLFQSRT DFEIMTELTR RFGREKEYTR GMDEMEWVRS LYDECKKANE GKFAMPEFEE
FWEKGFLDFG TGTPWVRHAD FRKDPEINAL GTPSGFIEIT SRKIGRYGYE HCQEHPMWFE
KTERSHGGPG SDKYPFWLQS CHPDKRLHSQ MCEAEAFRAT YAVQGREPVY INPVDAKAKG
IKDGDLVRVF NDRGQLLAGA VLSDSYPRGV IRIEEGAWYG PLTEKVGAIC TYGDPNTLTL
DLGTSELAQA TSANTCIVDF EKFRGEVPPV TSFGGPIEVI
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