| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1287 |
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| Symbol | sapC |
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| ID | 5136248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1368826 |
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| End bp | 1369713 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532745 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | YP_001217231 |
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| Protein GI | 147674762 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGCG ATAGTATTTA TCAAGAAGAA CATATTCCAA CCCAGTTTGA GCGTTTCTGG
CGAAGCTTTC GCGCGAATAA TCTCGCCATG TTTGGCTTGT GGTCTTTGCT GTTTATTGCA
TTGGTGACCA TTTTGTCGCC TTGGATTGCA CCTTACGACC CGCAAATGCA CTCCAGCGTA
TTGCTCCTGC CCCCTTCTTG GGAGCCCGAA GGTACCGTTG ATTATTTCCT TGGCACCGAT
GATCTGGGGC GAGATATCTT GTCTCACCTG ATTGATGGTT CGCTGTTTAG CATAGGTGCT
GCCGTCCTGA TTACACTGAT TGCAACCCTA GTCGGTGGAA CCATTGGTGC ACTGGCTGGC
ATGACCAAAG GACTGCTTTC TAGTACCTTA AACCATATTC TCGATACGGT GATGTCTATC
CCCTCACTGC TATTGGCGAT CATTTTTGTG GCTTTTTTGG GTGCCGGTGA GTTCAACATT
TTACTGGCGA TTGGTCTGGC ACTGATCCCG CGCTTTATTC GCTCCGTGTA TGTTGCGGTA
CACAATGAAG TGGAAAAAGA TTATGTCATG GCTGCCCGTC TAGATGGTGC AAATGAATTT
TATCTGCTCT GGCATTCCAT TTTCCCTAAT ATTCTGCCCA TTATCGTAGC GGAAATTACC
ATGGCACTCT CGATTGCGAT TCTGGATATC ACCGCGCTCG GATTTTTAGG GCTTGGTGCT
CAATCGCCCA GTACAGAGTG GGGAGCGATG CTCGGTGATT CAGTCGAGCT CATCTATATT
GCCCCTTGGA CAGTGACTCT CCCCGGCTTA GCCATTATGT TTACGGTGGT AGTGATTAAC
TTGGTCGGCG ATGGTGCACG CCAAGCCCTC AATGCGGGAG TCGAATAA
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| Protein sequence | MLSDSIYQEE HIPTQFERFW RSFRANNLAM FGLWSLLFIA LVTILSPWIA PYDPQMHSSV
LLLPPSWEPE GTVDYFLGTD DLGRDILSHL IDGSLFSIGA AVLITLIATL VGGTIGALAG
MTKGLLSSTL NHILDTVMSI PSLLLAIIFV AFLGAGEFNI LLAIGLALIP RFIRSVYVAV
HNEVEKDYVM AARLDGANEF YLLWHSIFPN ILPIIVAEIT MALSIAILDI TALGFLGLGA
QSPSTEWGAM LGDSVELIYI APWTVTLPGL AIMFTVVVIN LVGDGARQAL NAGVE
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