| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1283 |
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| Symbol | pspA |
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| ID | 5137258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1364247 |
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| End bp | 1364915 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532741 |
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| Product | phage shock protein A |
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| Protein accession | YP_001217227 |
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| Protein GI | 147673382 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTATTT TTTCTCGTTT TGCAGACATC GTAAATTCCA ACATCAGCGC GCTACTGGAT
AAAGCAGAAG ATCCAGAAAA AATGATCCGC CTGATTATTC AGGAGATGGA AGATACGTTA
GTGGAAGTGC GTACCAATTC AGCCAAAGCA ATGGCAGATA AAAAAGAGCT GGCGCGTAAA
GTGAGGTCGA TTGAACAGCA GTTAGAGGAT TGGCAGAACA AAGCGACGCT GGCGCTGACT
AAACAACGTG AAGATTTGGC GCGCGCGGCA CTGATCGAGA AGCAGAAACT GCAACATGTA
CTGAAAGGCT TGCACACAGA GCAGACGCTT GTCGAAGAAA CCATTGAAAA GCTGACAGGC
GAAATTGGTA AGCTCGAAAC CAAAATCACT GAAACCCGTG CGAAACAGCA AGCGTTAGCG
ATTCGTAGCC AAGCGGCGAG TCATCGTCGC GATGTGCAGC GTCATTTGCA CGCGGGTCGT
AGCGAAGAAG CGATGGCAAA GTTTGAGCAG TTCTCGCGTA AAGTCGATGA GCTGGAAGCG
GAAGCCGATC TTTATGCACA ATCAGGCCAA GCGCGCTCTT TGGAGCAAGA ATTTGCTGAG
CTACAAGCAC AAGATGAGAT TGAAAAAGAG CTCAACAAGC TTAAAGATCA GATGAAATCA
GACCAATAA
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| Protein sequence | MGIFSRFADI VNSNISALLD KAEDPEKMIR LIIQEMEDTL VEVRTNSAKA MADKKELARK
VRSIEQQLED WQNKATLALT KQREDLARAA LIEKQKLQHV LKGLHTEQTL VEETIEKLTG
EIGKLETKIT ETRAKQQALA IRSQAASHRR DVQRHLHAGR SEEAMAKFEQ FSRKVDELEA
EADLYAQSGQ ARSLEQEFAE LQAQDEIEKE LNKLKDQMKS DQ
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