| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1281 |
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| Symbol | pspC |
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| ID | 5136895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1363618 |
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| End bp | 1364007 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640532739 |
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| Product | phage shock protein C |
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| Protein accession | YP_001217225 |
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| Protein GI | 147673938 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | [TIGR02978] phage shock protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAAC GCGAGCTGTA CCGCGACCCA TATAACGGCA AAATAGCGGG GGTTTGTGCA
GGGTTAGCGA ATTACTTCGG CCTAGAGGTT TGGCTGGTGC GAATTTTAGT GATCACCGCC
GCCTTGCTGG GTGGGACGTT TTTAGTGCTG GTTGCTTATG TGGCAATGGC TCTGATGCTG
GAGAAGCTAC CGAAGCAGTA CCGCGAAGAT ATTCGTAGTC AGCAAGCGCA TACGCTGAAA
AGCAAACCTT GGGCACAAGG GCAAGCACCA AAAGAGCTGT TGCACACGCT AGATCGCGAT
CTCAGCCAAG TCGAGAGTCG AATTCGTGGT GTGGAGGCGT ATGTCACCTC CGAAGCGTTT
AAGGTCAACC GCGAGTTTCG CAAGCTCTAG
|
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| Protein sequence | MSKRELYRDP YNGKIAGVCA GLANYFGLEV WLVRILVITA ALLGGTFLVL VAYVAMALML
EKLPKQYRED IRSQQAHTLK SKPWAQGQAP KELLHTLDRD LSQVESRIRG VEAYVTSEAF
KVNREFRKL
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