| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1269 |
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| Symbol | |
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| ID | 5137824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1347884 |
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| End bp | 1349032 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532727 |
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| Product | putative ABC transporter solute-binding protein |
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| Protein accession | YP_001217213 |
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| Protein GI | 147675331 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000820878 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TGCTGACTTT TCTCACGACC TGCGCCCTCT CATTTGGCGT TTCTGCGCAA
TCATGGGAAG AGACTACCGA GAAAGCCCGC GGACAAACGG TTTATTTCCA TGCTTGGGGT
GGCAGCCAAG AGATTAATAG CTACTTGCGC TGGTCTGCTG ACCTACTCAA ATCCCGCTAT
GGCGTCACCT TGCAGCATGT GAAAGTAACG GATATCGCCG AAACGACTAC CCGTTTGATC
GCAGAGAAAG CGGCAGGAAA AAATGAGCAA GGCAGTGTCG ATTTGGTTTG GATTAACGGT
GAAAACTTCA AATCAATGAA AAACAACCAG TTACTCTACG GGCCATTTGT CGAAGATTTA
CCTAACTGGC CGAAAGTCGA CAAAAGCTTA CCCGTTGACA GCGATTTTTC CGAGCCAACT
GAAGGCTTAG AAGCGCCTTG GGGCGTCGGA CAATTGGTGT TTATTCATGA TAAGCAGCAA
GTGAACAATC CTCCGGCTTC ATTTGCCGAG CTGCTCAGCT ATGCGCAGGC TTTTCCAAAC
CGCATTAGCT ACCCACAGCC CCCTGAATTT CATGGTACCA GCTTCTTGAA AGCAGCCCTG
ATCGAACTGA CTCACTATGC GCCAGAACTC AATCAAGCCG TAGAGCCTGC CACATTTGAG
CAGCTCACCC AACCACTATG GCAATACTTA GATGAATTGC ATGCTGTGGC TTGGCGCAAA
GGCAAACAGT TTCCCGCTGG CTCTGCCCAG ATGATGCAAC TGCTGGATGA TGGTCAACTA
GACCTCGCGA TCACCTTTAA CCCGAATGCG GTATTTTCAG CGCAAGCTAC TGGCAAGCTC
GCACCGACAG CGCAAAGCTA TGCGATGAAA AAGGGCGCTT TAACCAATAT CCACTTCTTA
GCAATTCCTT GGAACGCTAA CGCAAAAGAA GGGGCGCTGG TGGCGATTAA TTTCCTCCTG
AGTGACGAAG CACAATCTCG TAAAGGGGAT TTGTCTATTT GGGGCGACCC TTCCATATTG
AAACCTCAGT TTCTGACAGG CAGTGCCAAA AATACCATCC TATTCCCTGC GATTGCTGAG
CCGCACCCAA GTTGGCAAAG CGCGCTCGAA GCAGAATGGC AAAAGCGCTA CGGTAATAGC
TTAAAGTAA
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| Protein sequence | MKKMLTFLTT CALSFGVSAQ SWEETTEKAR GQTVYFHAWG GSQEINSYLR WSADLLKSRY
GVTLQHVKVT DIAETTTRLI AEKAAGKNEQ GSVDLVWING ENFKSMKNNQ LLYGPFVEDL
PNWPKVDKSL PVDSDFSEPT EGLEAPWGVG QLVFIHDKQQ VNNPPASFAE LLSYAQAFPN
RISYPQPPEF HGTSFLKAAL IELTHYAPEL NQAVEPATFE QLTQPLWQYL DELHAVAWRK
GKQFPAGSAQ MMQLLDDGQL DLAITFNPNA VFSAQATGKL APTAQSYAMK KGALTNIHFL
AIPWNANAKE GALVAINFLL SDEAQSRKGD LSIWGDPSIL KPQFLTGSAK NTILFPAIAE
PHPSWQSALE AEWQKRYGNS LK
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