| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1267 |
|---|
| Symbol | |
|---|
| ID | 5135650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1346820 |
|---|
| End bp | 1347086 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640532725 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001217211 |
|---|
| Protein GI | 147673854 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3313] Predicted Fe-S protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000000298758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAAT TGGAGTTTTT CAATATTGTC AGCCCTTGCA TTGGGGTATG CAGTGTCGAT
GAGAAAGGCT ATTGCAAAGG TTGTTTACGT AAGCGTGAGG AGCGTTTTGA GTGGCTGAGC
ATGACTCCTG CGCAGCAATT ACATGTGATT AAACTCTGTC GGCAACGTTA TCGCCGTAAA
CAGCTGGAGG CGCGTGGTCA GAGCAAAACG GAAAATCTGA GCGAGAGTAC AGTACCGCCG
ACTGACGCTC AGCAGACTCT GTTTTGA
|
|---|
| Protein sequence | MEQLEFFNIV SPCIGVCSVD EKGYCKGCLR KREERFEWLS MTPAQQLHVI KLCRQRYRRK
QLEARGQSKT ENLSESTVPP TDAQQTLF
|
|---|
| |