| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1265 |
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| Symbol | |
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| ID | 5136335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1345337 |
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| End bp | 1346434 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532723 |
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| Product | ABC-type multidrug transport system, permease component |
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| Protein accession | YP_001217209 |
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| Protein GI | 147675256 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000431089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCC TGTTTCGCAT TAAAGCGGTC TTGGTGAAGG AGTTTCGTCA GTTATCACGC
GATCGCATTA CTTTTGGCAT GGTTGTGATG ATCCCACTCA TTCAACTCTT ACTATTTGGT
TTTGCGATTA ATACCGATGT GCGCAATATA CCGATTGGCG TGGTGGATCA AAGCGACTCC
TCATTCAGTC GGTTACTTGT GGAATCCGTC AAAGTCACTC AAGTGATCCG CGTCAAGCAG
CACTATCTCA CGGTTAATGA GGCGGAAAAA GCGATTGCCA GTGGTGATAT TCGCGCAGCG
CTGATCTTGC CGAGCGATCT GGTCGCACGC AGCCAACAAC AACGTGAATT AGGGCAATGG
TTGATTGATG GTTCAGATAC CATGATCGCA GGCGCGCTGT TAGGGCTAAA AAATATGCCG
CTTACCGATC TTCCAACCCT CGGCATCCAA CCTTTAACGC CCACTTTTGA AATCACTTTA
CTTTACAACC CCAGCCGCCG TTCTGCGGTG AATATCGTTC CCGGATTACT CGGGGTTATC
TTAACCATGA CCATGATCTT GTTTACCAGT GCAGCAATTG TGCGTGAGCG CGAACGAGGC
AATTTGGAGC TTTTGATCAC CACTCCTGTC CATTCCATTG AGTTGATGAT AGGAAAAATC
GTCCCGTACA TTTTTGTTGG TTTGATCCAA GTGGCGATTA TTCTTGGTTT AGGGCATTTT
ATTTTTGCCG TTCCGATTAA TGGCGCGTTA AGCCAAATTC TCTTCGGCAC TTTACTCTTC
ATTTCTGCCA GTTTGACCTT GGGTTTAGTC ATTTCCACCA TCGCCAACAC CCAGCTCCAA
GCCATGCAGA TGACAGTATT TATTCTACTT CCTTCCATTC TCCTCTCCGG ATTCATGTTT
CCGTATGAAG GAATGCCTAC CGCAGCACAA TGGCTCTCTG AACTGCTCCC CGCGACTCAC
TTTATGCGTT TGATCCGTGG CATTGTATTA CGTGGGGCAG ATTTAGCTGA CTTGTGGCGC
GATACGCTCT GGCTCGCGCT CTTTACTCTC TTTGGATTGA TGCTGGCTGC GCTGCGCTTT
AAAAAATCGC TCGATTAG
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| Protein sequence | MNSLFRIKAV LVKEFRQLSR DRITFGMVVM IPLIQLLLFG FAINTDVRNI PIGVVDQSDS
SFSRLLVESV KVTQVIRVKQ HYLTVNEAEK AIASGDIRAA LILPSDLVAR SQQQRELGQW
LIDGSDTMIA GALLGLKNMP LTDLPTLGIQ PLTPTFEITL LYNPSRRSAV NIVPGLLGVI
LTMTMILFTS AAIVRERERG NLELLITTPV HSIELMIGKI VPYIFVGLIQ VAIILGLGHF
IFAVPINGAL SQILFGTLLF ISASLTLGLV ISTIANTQLQ AMQMTVFILL PSILLSGFMF
PYEGMPTAAQ WLSELLPATH FMRLIRGIVL RGADLADLWR DTLWLALFTL FGLMLAALRF
KKSLD
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