| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1261 |
|---|
| Symbol | |
|---|
| ID | 5135178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1340835 |
|---|
| End bp | 1341698 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640532719 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001217205 |
|---|
| Protein GI | 147675291 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.647772 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACTC GTTTTCCTGC TGAATTGCTG CTTGTTGTGA CCACCCTATT AGCTGCGGGA
GGCTGGGTTT TCTCGAAGCA AGCGATTCAA GAATTGCCCC CGTTTGGCTT TATTGGCTTA
CGCTTTATCG CGGCCTCGCT TTGTTTGTTG CCATTTTGCT TGAATGCGTT GAAACAAGCC
TCACGGCAAG CGTGTTTACA ATCGATGGGG GTCGGGGTTT TACTCGCCGC GTCACTTTTT
TGTTGGATCC ATGCCATTTC AATCAGTGAT ACCTTGGGTG AGGGCGCGTT TATCATGAGC
CTCTCTATGT TGTTTGTACC GCTATTGGCA TGGCCGATTT TCGGACAGCG ACCGATTCGT
GCCTTTTGGC TTTCACTGCC CGTGGCGGTC GTGGGACTAT TCTTGTTGGC ATGGAATGGC
ACTTGGCAAT TTGCCGCGAA TCAGTTGTGG TTTTTAGCGG CCTCATGTTG TTTGGCGCTG
CATTTTAACT TCAATAGCCG TTTCTCAAGC CAGCTTCCGC CTATGTTATT GACGACCTTA
CAATTGTTTA CTGCAGGCTG TTTGGGTATC ACGTTATCTT GGTTAACTGA AAGTTGGCCT
GCGACCATCA GTCTAGTGAC CTGGAAGTGG TTTGCATTGA GTGTGTTACT GGCCACTAGC
TTGCGTTATT TAATGCAAAC CATGGGACAA AAGAGTGCCA ATCCGACGAA TGCGGCGCTA
CTGATGCTGT TGGAGCCGGT GTGGACGTTA GTGTTAAGCG TGGTGATTTA CCAAGAAACC
ATGCCATTTA ACAAAATGTT GGGCTGTGGA TTTCTGTTAG CCTCTTTGCT GTTGTATCGA
GTCAGCTTGC TGCGTTTGCG ATAA
|
|---|
| Protein sequence | MRTRFPAELL LVVTTLLAAG GWVFSKQAIQ ELPPFGFIGL RFIAASLCLL PFCLNALKQA
SRQACLQSMG VGVLLAASLF CWIHAISISD TLGEGAFIMS LSMLFVPLLA WPIFGQRPIR
AFWLSLPVAV VGLFLLAWNG TWQFAANQLW FLAASCCLAL HFNFNSRFSS QLPPMLLTTL
QLFTAGCLGI TLSWLTESWP ATISLVTWKW FALSVLLATS LRYLMQTMGQ KSANPTNAAL
LMLLEPVWTL VLSVVIYQET MPFNKMLGCG FLLASLLLYR VSLLRLR
|
|---|
| |