| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1254 |
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| Symbol | |
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| ID | 5136098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1327307 |
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| End bp | 1328953 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640532712 |
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| Product | putative trypsin |
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| Protein accession | YP_001217198 |
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| Protein GI | 147673259 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5640] Secreted trypsin-like serine protease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000770222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA CATTTTTATC AGGAGTGGTT GGAACACTTC TTTTTACATC TTTTCAGTTC
AGTGCTTCTG GAACGGAATC CGGAGTCTCT AGCCGTATTA TTGGTGGAGA ACAAGCGACT
GCAGGCGAAT GGCCTTATAT GGTTGCGCTA ACCGCTCGAA ATAGTAGCCA CGTTTTTTGT
GGTGGTAGTT ATCTTGGTGG TCGTTATGTT TTGACTGCTG CGCACTGTGT GGATAAAGAA
GATCCTGCTA AGGGGGATGT ACTGCTCGGT GCTTTTGACA TGAATGATGT TAATACTGCA
GAGAGAATTC ATGTCAGACA AATTTATGTG CATAATAGCT ATATTACTGC TTCAATGGGC
AATGATATTG CTGTTCTTGA ATTGGAACGG GATCCCTTAC CTCGAAGATC TGTGCAAATT
TCAGATTCAT CGGATTTCAA TGAGTTGACA AAAGATTCGC CAATGACGGT GATCGGTTTT
GGTAATCGTA AAGAAGTCGA TGGTGAGAAA TCCGATCCTG CAACCATATT ACACCAAGTA
CAGGTCCCCT TTGTTCCACT CCCGGAATGT AAAACAAAAG GCAGTGATCA GGACGCTAAA
AACAATTACT CTCAACTAAC CAATAACGCG TTTTGTGCCG GTTCGTTTGG CAAAGACGCT
TGTTCTGGTG ACAGCGGTGG CCCTATCTTT TTTGATTCCA ACAATGGTCG AAAGCAGATG
GGCGTTGTTA GCTGGGGGGA TGGCTGTGGT CGAGCCAATA GTCCTGGTGT TTATACTAAC
CTCAGCGTTT TTAATGATTG GTTAGATGAT CAGCAACTAG GTCTATCCTA TCGCCAAAAA
CGAGACTTAG GAGTAGTAAG ACCAGGTTCG TATACTCATA ATTTAACTTT TACGAATAAC
GGTAATGCTG ACATCAACTT GGGCAATACC TTTGTTTTTG TTGTTGGCAT TTCTAGAACA
GACGCTGCTG CGATTGTGAA TAATAGCTGT ACAGGAGTGT TAGCTTCAGG AGCGAGTTGT
GACGTTGAGT TTAGCTATAA TATTACTGAA CATAAACAGA GTTATGTAAA ATTGATAATA
GGATCAAGTA CTTATAAGAC GGGTGCTGTT CATGCCTACC TCTATTTTGA TGCTTTGGAC
GCTGCGCCTT CAGAAACAGT AAGCTTTTTA GCGAATTTAC CTGTCCATAA TACCCACGTG
AATGATCACC CTTGGACGGT TGTCGGTAAT GGTCTGCAGA CTTCAGCTTT ACCAGCTGGA
GAAGAGTCTG TAATTTTGTT GGAAAACCTA CCTCAAGGTA GACTCAAATT CCACTATAAA
CTGTCGTCAA GTGAAGTTCT CGATCAGCTA TTTGTCTACG TGAATGATAA GTTTAAGGGT
AAATACTTTA ACAACACGGA AAATCTAGCC ACACTTGATA TGTATGGTAC GAATAACAAG
GTTCGATTTG TATACAGAAG ACATAGCGGT AGTACTGATG ACCAAAGTCG AGCCATATTG
AGCCAAATAA GCTACGATCC AAAATTCTTT GATCTACCTC CACCGCTTGA TATTCGTATC
GGTGATAGTG GCGGCGGTAG CCTAGGTGGG GCAGCCTTAG CTCTTCTCTT TGGTTGTGGC
TGGTTACGTC GTCGTCAACG CGTCTGA
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| Protein sequence | MNKTFLSGVV GTLLFTSFQF SASGTESGVS SRIIGGEQAT AGEWPYMVAL TARNSSHVFC
GGSYLGGRYV LTAAHCVDKE DPAKGDVLLG AFDMNDVNTA ERIHVRQIYV HNSYITASMG
NDIAVLELER DPLPRRSVQI SDSSDFNELT KDSPMTVIGF GNRKEVDGEK SDPATILHQV
QVPFVPLPEC KTKGSDQDAK NNYSQLTNNA FCAGSFGKDA CSGDSGGPIF FDSNNGRKQM
GVVSWGDGCG RANSPGVYTN LSVFNDWLDD QQLGLSYRQK RDLGVVRPGS YTHNLTFTNN
GNADINLGNT FVFVVGISRT DAAAIVNNSC TGVLASGASC DVEFSYNITE HKQSYVKLII
GSSTYKTGAV HAYLYFDALD AAPSETVSFL ANLPVHNTHV NDHPWTVVGN GLQTSALPAG
EESVILLENL PQGRLKFHYK LSSSEVLDQL FVYVNDKFKG KYFNNTENLA TLDMYGTNNK
VRFVYRRHSG STDDQSRAIL SQISYDPKFF DLPPPLDIRI GDSGGGSLGG AALALLFGCG
WLRRRQRV
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