| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1245 |
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| Symbol | |
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| ID | 5137827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1317376 |
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| End bp | 1318764 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532703 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_001217189 |
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| Protein GI | 147674624 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000271676 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGTATCA GTTGCATGCC AATTAAATCT CGGGCGTTAC GTCATCTCAG CCTAAAAACC
CGCTTGCTCC TTGCTGCGGC ACTATGGCTG GGCGCGATGA TCTTGGCCGC CGGCTATTTG
ATCCCAAATC TCATCCATCA ATATTTGCTG GAAGATGTGC AAAACCAGTT GCAACTGTCG
ATGGATGAGA TCACCGCCAA CTTGGAAGCC AATCCACAAG GACAATTAAC CCTCACCACT
CGACTTGCGG ATCCCCGTTT TACCCAGCCT TATAGTGGCC TTTACTGGTC AGCCACTTTA
GGCGATCAAA CGCTTCGCTC ACGCTCGTTG TGGGATCGCT TTTTGACCGA AGAAACCCAT
GTTCACGGTA CGATTTATCT TGGCGCGAAA GAGGAATCGT TAATTGTATT AAAGCGTACG
GTTTATCTGC CCGAATTTTC ACAACCCATC ACAATCACGA TAGGCTTAGA TGATGCCCCG
CTAAAAGCCA CGCTACAGCG CGTGAGCAAA GAGTTGTGGA TGATTTTGGC TCTATTGTTC
AGCGGGATAC TCGTTTTAAC TGGCGTACAA GTGACGTGGT CACTCCGCCC ACTTTCGAAA
ATGCAGCGCG AACTCTCAGC CTTGCGAGAT GGCCAGCAAA ATGCGTTGAA TGGCGATTAC
CCACAAGAGA TTTCACCGCT AGTCAATGAT CTCAACGCTC TCCTCTTTCA TTACCAAGAG
CTGCTTGAGC GAGCCAGACA CCATGCGGGG AACTTATCCC ACGCATTAAA AACACCACTT
TCTGTGCTCA AAAACGAAGT CACTCAGTTG AATGATGCCC AGCTCAGAAT CCAGTTACAG
CCTTCTGTTG AGCAGATCCA GCAGCAAATT GACTACCATC TAGGGCGTGC TCGTATGGCG
GGTTCCGCCA ATATTCTTTC GGTTAAAACC GCACCCAGTG CGCGAGTCGA TGCTATTTCA
CAAGCATTTG ATAAGGTTTA CGCTGAACGT GGAATCACCT TGGTGAATGA GCTGGATTCG
GACTTAGAAG TGGCCGTTGA ACCGACTGAC CTAGATGAAA TGATCGGTAA CCTTCTGGAA
AACAGCTACA AATGGGCCAA CAGCTTAATT CGTGTACACA GCCAAATACT GAGTGACGAT
TGGGTACAGA TCTGCGTGGA AGACGATGGC GCAGGCATCA GTGCAACGAA CCGCGAAAAA
GCCCTCAAAC GCGGAGTGCG CTTGGATGAA ACCACGCCCG GCACTGGGCT TGGGCTTAAT
ATTGTGAGTG AAATGGCGCA CAGTTATCGT GGAGCATTGG CTTTAGGAGA GAGTCAGTTA
GGCGGCTTAA AAGCCACTCT GACCTTAAAA CAACCCACTC GCGCAGCCAA AGCCGTCAAA
TCCCATTAA
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| Protein sequence | MGISCMPIKS RALRHLSLKT RLLLAAALWL GAMILAAGYL IPNLIHQYLL EDVQNQLQLS
MDEITANLEA NPQGQLTLTT RLADPRFTQP YSGLYWSATL GDQTLRSRSL WDRFLTEETH
VHGTIYLGAK EESLIVLKRT VYLPEFSQPI TITIGLDDAP LKATLQRVSK ELWMILALLF
SGILVLTGVQ VTWSLRPLSK MQRELSALRD GQQNALNGDY PQEISPLVND LNALLFHYQE
LLERARHHAG NLSHALKTPL SVLKNEVTQL NDAQLRIQLQ PSVEQIQQQI DYHLGRARMA
GSANILSVKT APSARVDAIS QAFDKVYAER GITLVNELDS DLEVAVEPTD LDEMIGNLLE
NSYKWANSLI RVHSQILSDD WVQICVEDDG AGISATNREK ALKRGVRLDE TTPGTGLGLN
IVSEMAHSYR GALALGESQL GGLKATLTLK QPTRAAKAVK SH
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