| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1242 |
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| Symbol | |
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| ID | 5136130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1314085 |
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| End bp | 1316058 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532700 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | YP_001217186 |
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| Protein GI | 147675688 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000376746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCTCTT TGCGCGTTGT ACCGAGCGCA TCACACAGGA ATTTGTCTAA ACGCATGCTT
ACCTCATCTG CTGGAAGTCG GCTATTATAC AGACCTCACA CAATAATTAC CCAGCGCAAT
TGCTTGCGGC CGACATCAAA CGATGCAAAA GCCGTCAATT GCCCAGATAA CCTCGGTAAC
TCCCAGCGGA TGTATACGTT ACGACCTTAT CAAGCCGACT CAGTGAAAGC CGTCGTGCAC
TATTTTCGCC AGCACTCTAC CCCGGCCGTG ATTGTGCTTC CGACCGGCGC AGGAAAAAGC
TTAGTGATCG CAGAGCTTGC GCGCCTTGCC CGTGGCCGCG TATTGGTGTT GGCCCATGTC
AAAGAGTTGG TTGAGCAAAA CCACGCCAAA TATGAAGGCT ATGGCTTAAC CGGCGCGATT
TTTTCCGCAG GCTTGGGGCG CAAAGAAACC GATCAACAAG TGGTGTTTGC CTCAGTGCAA
TCGGTGGTGC GCAACTTATC TGAGTTCCAA AACCAGTTCT CTTTATTGGT GATTGATGAG
TGCCACCGCG TCCCCGATGA CAAAAACAGC AGTTATCAAA AAGTGATCAC GCATTTGCTG
GAACTCAATC CGGGCATGAA AGTGCTCGGA CTGACCGCAA CCCCCTATCG ACTCGGGATG
GGATGGATTT ACCAGTATCA CACTCGTGGT TTAGTGCGCA GTGAAGAGCC GCGTTTTTTC
CGCGACTGTA TTTTTGAGCT CCCCATTCAC TATTTATTGG ATGAAGGTTT TCTCACCCCC
GCTCAATTGA TTGATACCCC CGTCATGAGC TATGACTTTT CGCAGTTGAA ACCAGCCAAT
ACCGGGCGCT ATCGTGAATC AGAACTCGAC TTGGTGATTG AGCAGTCACA GCGCGCCACT
CCGCAAATTG TTGCCCAGAT CATTGAGCTT GCCAAAGCGC GACAAGGGGT GATGATTTTT
GCGGCGACCG TGCGTCACGC CGAAGAGATC TACCGTTTAC TGCCTACCGA GCACGCTGCT
TTAGTGATCG GTGATACCCC GACGCCAGAG CGTGATCGCA TTATCCAAGC GTTCAAACAA
CAACAGATTA AGTTTTTGGT CAATGTGTCC GTGCTCACTA CCGGATTTGA TGCGCCGCAT
GTCGATTTGA TTGCGATTTT AAGGCCAACG GAATCGGTCA GTCTCTATCA ACAAATTGTC
GGCCGCGGGC TACGCCTTGC GGCGGGCAAA TCCGACTGTT TGGTGCTCGA CTATGCGGGT
AATCAGTACG ATCTGTATCA ACCTGAAGTG GGCGATCCGA AACCCGATTC AGACAGCGAA
ATCATCACCA TTCCCTGCCC CGCTTGCGGT TTTAACAATA ACTTTTGGGG CAAGCTCGAT
GCGAACGGCT TTCTGATTGA GCACTATGGC CGCCGCTGCC AAGGCTATTT CACCGATGAT
GAGACGGGTG AGCGCGAGCA TTGTGGCTAC CGTTTTCGTG CGAAATACTG CAATGAATGT
GGTGCGGATA ACGACATCGC CGCTCGCATC TGCCATGAGT GTGACACCAC GTTAGTGGAC
CCCGATAAGA AACTCAAAGA GGCACTCAAT CTTAAAGATG CGCTGGTGTT TGAATGTACC
GACATGAGCC TAAAAGTTCA TAAAGACGCC AAAGGGAAAA GCCAGCTTCA AGTGACTTAC
CACGGGCAAG ATGCGGTGCA AGTACACCAG TTTTGGCCAC TGAATACGCC GCGCCAAAAG
CAGCAATTTC ACGACCAATT TGTACGTCCA CATCTGGCTG ACAAACATCG GCCTTTTGAG
GCAGCAACGC CCGCCAAAGT CGTGGATCAT CAGCACCGTT TTCGGCCACC CCTGTTTGTG
ATTGCGCGAA AATCGGGCCG CTTTTGGACC ATTCGCGACA AAGTATTTGC CGATGAGTTC
GCCTCCCCAA TCGACGTTCA CTTATCAAAC CGAGCTTATA CCATTCCTAC TTGA
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| Protein sequence | MASLRVVPSA SHRNLSKRML TSSAGSRLLY RPHTIITQRN CLRPTSNDAK AVNCPDNLGN
SQRMYTLRPY QADSVKAVVH YFRQHSTPAV IVLPTGAGKS LVIAELARLA RGRVLVLAHV
KELVEQNHAK YEGYGLTGAI FSAGLGRKET DQQVVFASVQ SVVRNLSEFQ NQFSLLVIDE
CHRVPDDKNS SYQKVITHLL ELNPGMKVLG LTATPYRLGM GWIYQYHTRG LVRSEEPRFF
RDCIFELPIH YLLDEGFLTP AQLIDTPVMS YDFSQLKPAN TGRYRESELD LVIEQSQRAT
PQIVAQIIEL AKARQGVMIF AATVRHAEEI YRLLPTEHAA LVIGDTPTPE RDRIIQAFKQ
QQIKFLVNVS VLTTGFDAPH VDLIAILRPT ESVSLYQQIV GRGLRLAAGK SDCLVLDYAG
NQYDLYQPEV GDPKPDSDSE IITIPCPACG FNNNFWGKLD ANGFLIEHYG RRCQGYFTDD
ETGEREHCGY RFRAKYCNEC GADNDIAARI CHECDTTLVD PDKKLKEALN LKDALVFECT
DMSLKVHKDA KGKSQLQVTY HGQDAVQVHQ FWPLNTPRQK QQFHDQFVRP HLADKHRPFE
AATPAKVVDH QHRFRPPLFV IARKSGRFWT IRDKVFADEF ASPIDVHLSN RAYTIPT
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