| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1238 |
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| Symbol | |
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| ID | 5136637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1309722 |
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| End bp | 1311158 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532696 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217182 |
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| Protein GI | 147675522 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0298417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG TATTAGTGTT AGGTGCATCA GGTTATGTAG GGGCGCAGTT GCTGCCACTG
CTACTGAATG CGGGATACCA TACCACGGCC GCCTCTCGTC ATATCGAGAC ATTGCATGCG
CGCTTGCCCA CTCATCCCAA CTTAACTCGG CTCACGCTGG ATTTAGCGGA TCGTCAGAAA
ACGCTCGCCA CCATCCCCAA TTATGATTTG GTCTTTTTCT TGGTTCATGG CATGGCGCAT
GGCGGGGATT TTGTCGATTA CGAGCTTTCA TTGGCACAAA ACGTAAAAGA CGCGCTCGAT
CTTGCGCATA GCCAAGTACG ACATGTGATC TATTTAAGCT CGCTCCAACC GGAGTCTGGC
CGCTCCCCTC ATTTACAAGC ACGTTACGCT ACTGGGCAGA TACTGCGCCA GTCATGTGTC
CCGATCACGG AGCTGAGAGC GGGGGTTATC ATCGGCCCTG GCTCGGCTGC ATTCGAAATC
ATGCGCGATT TTGTCTACAA CTTGCCAGTA CTCATTACGC CTAAATGGGT TGACTCCCAA
GCCAATCCGA TTGCTCTGGC TAATCTCAAC ACCTATTTAC TGAAATTTGC CGAAGAGCAG
CCAAAGATGC ATCAGACGTT TGAGCTTGGC GGGCCTGATA TTCTCAGCTA TCGCGAACAG
TTTCAGATTC TGTGTGAATT GACCGGGAAA CACTATCGCT TATGGTCGAC GCGCTTTCTC
ACTCCAAGCA TGGCTGCACG CTGGCTCGGT ATGGTGACTT CGGTGCCAAG CTCAATTGGA
CGCTCGCTGC TGGAAGGGTT AACACATGAT TTTATTGCCG ACACCCAAGC GATTGAAGCA
CGCTATCCAC AGCCCTTGAT CGCCTATCGA GAAGCGGTCA AAGCGGCGAT CAGCAGCGAA
GGGACCTTTG TGCGTAGCCA AGTATGGGGA TTTGACCCTC ACGCGATTGT CCGTTGGCAA
CCGGGCTTTG GTTATTACCC CAAGCAAGCG GGGGCCAGCA TCGAAACCGA GTTAAGCAGC
CATGCGCTGT GGAAAGTCAT CCGCACTATA GGCCGCCGCG ATCAAGGGTA TTTTTTTGCC
AATATTCTGT GGCGTACTCG TGAATGGTTG GATGTGCTGT TTGGTGGTGG CAAACCGATT
CGTCGCTATC CCGCTGGCGC TGAACTCGCA GTGGGAGATT ATATCGACTC TTGGAAGGTG
ATCCGCTGCC AACCGCAGCA GTTTTTGTCC TTACTGTTTG GTATGAAAGG TCCGGGGCTA
GGACGTTTGG AATTTACCAT CGATGATTTG GGCGATAAGC GACGCCTGAA TGTAACGGCA
TGGTGGCACC CACAAGGTTT TCTCGGCTTG ATGTACTGGT ATGCCATGAT GCCAGCGCAT
CTGTTTATCT TTCGTGGCAT GGTAAAAGCA ATCATAAAAA AATCCCGCCG AGATTAA
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| Protein sequence | MKKVLVLGAS GYVGAQLLPL LLNAGYHTTA ASRHIETLHA RLPTHPNLTR LTLDLADRQK
TLATIPNYDL VFFLVHGMAH GGDFVDYELS LAQNVKDALD LAHSQVRHVI YLSSLQPESG
RSPHLQARYA TGQILRQSCV PITELRAGVI IGPGSAAFEI MRDFVYNLPV LITPKWVDSQ
ANPIALANLN TYLLKFAEEQ PKMHQTFELG GPDILSYREQ FQILCELTGK HYRLWSTRFL
TPSMAARWLG MVTSVPSSIG RSLLEGLTHD FIADTQAIEA RYPQPLIAYR EAVKAAISSE
GTFVRSQVWG FDPHAIVRWQ PGFGYYPKQA GASIETELSS HALWKVIRTI GRRDQGYFFA
NILWRTREWL DVLFGGGKPI RRYPAGAELA VGDYIDSWKV IRCQPQQFLS LLFGMKGPGL
GRLEFTIDDL GDKRRLNVTA WWHPQGFLGL MYWYAMMPAH LFIFRGMVKA IIKKSRRD
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