| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1229 |
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| Symbol | |
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| ID | 5137757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1295527 |
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| End bp | 1296165 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532687 |
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| Product | putative outer membrane protein |
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| Protein accession | YP_001217173 |
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| Protein GI | 147673877 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000815007 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATCA AATCATGGGC TCTGCCACTA TTTCTTTGCA CTGTAACCAC GTCGGCATTG
GCAAATCAAG GTCAATATAC AAAGCACGAA GGTGATGAGT ACGACTATCG TCCAACTCCA
CTCGCGAATC AGATTGCGGA TCTGCAAGAT GACGATAGAG ACGGTGTTAT CAATGCTCGC
GATCTTTGCC CTGATACACC TAAGGGCTCT GAAATCGATA ATGATGGCTG TGGCACCTTT
GTCAAATCAT CACAGATGCA GCAATTACAT ATTCTGTTTG CTAATGACTC GAGCTCGATT
GAGCCTGCGT TTTTAACGCA AATCCGTCAA ATGGCTGAGT TTTTGCAAAC CTATCCTTCA
ACATCTATTG AGTTACAAGG CTACGCGAGC AAAGTAGGCA GCGCGGAACA TAACCTTGCC
CTCTCTAAGC AGCGTTCAGA AGCGGTTCGT GACCAATTAC TGCGTTATGG CGTAGCGCCA
GAGCGCGTGA ACATTGTCGG ATACGGGGAT AGCGTTTTGG AAGTAGAAGG TACCGATGAT
GTGAGCCACG CTCGTAACCG TCGTGTTACT GCAACAGTTG TTGGCTACAA AGGTGAAGTG
GTCAAAGAGT GGACGATTTT TACGACACTT CCTATGTAA
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| Protein sequence | MSIKSWALPL FLCTVTTSAL ANQGQYTKHE GDEYDYRPTP LANQIADLQD DDRDGVINAR
DLCPDTPKGS EIDNDGCGTF VKSSQMQQLH ILFANDSSSI EPAFLTQIRQ MAEFLQTYPS
TSIELQGYAS KVGSAEHNLA LSKQRSEAVR DQLLRYGVAP ERVNIVGYGD SVLEVEGTDD
VSHARNRRVT ATVVGYKGEV VKEWTIFTTL PM
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