| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1225 |
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| Symbol | |
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| ID | 5136684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1285104 |
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| End bp | 1286321 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532683 |
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| Product | putative multidrug resistance protein |
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| Protein accession | YP_001217169 |
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| Protein GI | 147675274 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAC TGCATTCTCC TCAATATTTA AAAGTGACCT TTGCCCTCGC TTTCGGTTCA
TTTTTAGTTT TCTGCAATCT TTATCTTTTC CAACCCATGC TACCTTATTT GGCGAATCAC
TTTGCGGTTT CGGAAACCCA AATTAACTGG TTGTTTGCAG CTTCCACCTT AGCTTTATCA
CTTTGCCTCG TGCCTTGGGC GGTCACTTCG GAAGCCGTTG GGCGACGCTT AGTGATGCTG
ACCGGCTTAT TTGCTATGCC TGTGATTGGC TTAGCCATGC TTTATGCTGA GCAATTTTGG
TTTTTGGTAC TCACCCGAGC TTTAATGGGC GTGGCTTTAG CGGCTTTTGC TTCGGTTGCG
GTGGCGTACA TGGTGGAAGA GCTTTCTCCG CAAGCGTTTG GTAAGGCGAT TGGTGGCTAT
ATCGCGGCAA ACTCATTGGG CGGTATTACC GGCCGCATTG CTGGAGGGTT ACTCACCGAT
GCCCTTGGCT GGCAACATGC GGTCGTTGCG ATGGCCATTT TTACTCTGCT CGGCGCGCTT
TTGGTCGCGT ATTTGCTGCC CATTCAACAG CATTTTAAAC CGCAACGTGG GCTGTTTTTC
CATCACAATC GTGCGTTAGT CAAACATCTG CAAAACCGCA CACTCTGGCT AGCTATGTTG
ATTGGCGGTG TTAACTTCGC ACTGTTTGTT AACCTCTATT CCGTGATGGG ATTTCGTTTA
GTCGCCGAAC CCTACTCACT GCCCATAGGT ATTGCTTCAC TGATTTTCGT CTGTTATTTA
GCTGGAACAC TGAGCTCAAA GCTCACCGCC AACTGGAACC GGCGTTTCTC GGCGATTCCC
GGCATGATGC TTGGCGCACT CATCAGTATG GCAGGCATGT TGATTGCGTT GATTGAAGCG
ATACCCGCCA TGCTGGTCGG CTTGATTTTG ATTAGCTTCG GCGCCTTTTT CACCCATACT
TTGGCTTACG CTTGGGTCAG TCAAAAAGCC ACACAAGCCA AAGCCACCGC GACTGCACTT
TACTTGGTTC ACTATTATAT TGGCGGTAGT TTAGGCGGTT TTTACCTGCT GTACTGTTGG
CAACACGGTG GTTGGGAAAT GGTCACACTC GGCGGGTTGG GGCTTTACTT CATCTTGTTT
ATCCTTGGTT GGCGCTTAAG CCGACAAAAT AAACAAACGC CACAGGGCAG TCAGGCTTTG
GCCAGCCCTT CGGCCTAA
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| Protein sequence | MIELHSPQYL KVTFALAFGS FLVFCNLYLF QPMLPYLANH FAVSETQINW LFAASTLALS
LCLVPWAVTS EAVGRRLVML TGLFAMPVIG LAMLYAEQFW FLVLTRALMG VALAAFASVA
VAYMVEELSP QAFGKAIGGY IAANSLGGIT GRIAGGLLTD ALGWQHAVVA MAIFTLLGAL
LVAYLLPIQQ HFKPQRGLFF HHNRALVKHL QNRTLWLAML IGGVNFALFV NLYSVMGFRL
VAEPYSLPIG IASLIFVCYL AGTLSSKLTA NWNRRFSAIP GMMLGALISM AGMLIALIEA
IPAMLVGLIL ISFGAFFTHT LAYAWVSQKA TQAKATATAL YLVHYYIGGS LGGFYLLYCW
QHGGWEMVTL GGLGLYFILF ILGWRLSRQN KQTPQGSQAL ASPSA
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