| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1216 |
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| Symbol | metA |
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| ID | 5136327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1279297 |
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| End bp | 1280256 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532674 |
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| Product | homoserine O-succinyltransferase |
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| Protein accession | YP_001217160 |
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| Protein GI | 147675666 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1897] Homoserine trans-succinylase |
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| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.350697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAGGG AGAAAGCTGT GCCGATTAGA ATCCCCGACC AATTACCGGC GAGTGATGTG
CTACGTAACG AAAACATCTT CGTTATGTCC GAATCGCGTG CTTCGACGCA GGAAATACGC
CCACTCAAGG TGCTATTGTT AAACTTAATG CCTAAAAAAA TTGAGACGGA AACTCAGTTT
TTACGCCTCT TGTCCAACTC CCCTTTGCAG GTCGATATCG AGCTGCTGCG CATCGATGAC
AGGCCAAGCA AAAATACTCC AGAAGAGCAT CTCAACACCT TCTATCGCCA ATTTGAGCTG
GTCAAAAATC GCAACTTCGA TGGGTTAATC ATCACGGGCG CGCCACTGGG CTTAGTACAA
TTTGAGGATG TCGCCTATTG GCAGCATCTA CAAAACATCA TGGCTTGGGC TAAAGCGCAT
GTGACCTCCA CTCTTTACAT CTGTTGGGCG GCGCAAGCTG GGCTGAAGCT GCTGTACAAT
TTGCCCAAAC GTACGCGTGA AGAGAAACTG TCCGGTGTCT ATTACCACGA CATCCATAAG
CCGTTTCACC CTCTACTGCG TGGGTTTGAT GATCGCTTTC TCGCTCCGCA CTCTCGCTAC
GCAGATTTTG ATGCGGAATT TTTGGCTGAG CATACTGATC TCGATATTCT GGCAACGTCC
GATGTGGCGG GCGTTTACCT CGCAGCGACC AAAGATAAGC GTAACGTGTT TGTGACTGGC
CACCCTGAGT ACGATGCTTA CACCCTACAT GGTGAATATG TGCGTGATCT GGGCGAAGGG
CTTAATCCTG CGATCCCCGT CAATTACTAC CCCAATGACA ACCCAGATAA CAAACCTTGC
GCCAGTTGGC GTAGCCACGG GCACTTGCTG TTTGCCAACT GGCTTAACTA CTGCGTTTAT
CAACAAACAC CGTATGATTT GGAAAAATTC AGCGAAGCCA ATTTTACCAA AGACGAATAA
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| Protein sequence | MLREKAVPIR IPDQLPASDV LRNENIFVMS ESRASTQEIR PLKVLLLNLM PKKIETETQF
LRLLSNSPLQ VDIELLRIDD RPSKNTPEEH LNTFYRQFEL VKNRNFDGLI ITGAPLGLVQ
FEDVAYWQHL QNIMAWAKAH VTSTLYICWA AQAGLKLLYN LPKRTREEKL SGVYYHDIHK
PFHPLLRGFD DRFLAPHSRY ADFDAEFLAE HTDLDILATS DVAGVYLAAT KDKRNVFVTG
HPEYDAYTLH GEYVRDLGEG LNPAIPVNYY PNDNPDNKPC ASWRSHGHLL FANWLNYCVY
QQTPYDLEKF SEANFTKDE
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