| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1211 |
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| Symbol | |
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| ID | 5136676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1274068 |
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| End bp | 1275498 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532669 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217155 |
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| Protein GI | 147674749 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000512131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGA AATCTCTCTC TCTGGCGATC TGCTCTATAT TATTTATGCC GATTGCTCAT
GCAGCGCCTC TCTCATTTCA AGAAGCTTGG GACTTGCTGC AACAACAAAA CAACTCGCTT
GCGGCGCAAA GAGCCAATGT GGAACGTTAC GCTCATCTGA AAGATGCCAC ACAAAATCTC
AATCTACCCT CGGTCAGTGT GGGAGCCAAT TTTACGCGGC TTGATCAGGA TGTAACACTT
TCCGGCAAGC AGATAGTAGA CAGCGCTGGC GGAATAGACC CAAATCTGAT TGCTAGCCTA
TCGCCTAGTC TCTTACCACT AGTTACTCAT CTGGGAGCCG CTAAATCTAC CATCACTGAA
CGCGATATTT TCACTTCCTC GATCCGTGCG ATTTGGCCAA TTTTTACTGG CGGACGAATT
ACTGCTGCGC AAGATGCCGC CGCGGGTAAA GAAGAGGAAG CGCAAAGTCA GCTCGCGATG
GAAATACAAG CGCGATATGA AGATTTAGCC AAATATTACT TTAGCGTAGT GTTGGCCAAA
GAGGTGCTCG CTACCCGAAT CGCGGTTGAA GAGGGACTCA CGCAACACAG AGATAATGCC
CTTAAACTTG AGCAACAAGG ACAAATTGCT CATGTCGAGC GCCTGCAAGC GGATGCGTCA
CTGGATAAAG CCAAAGTTGA GCGTAAAAAA GCACAAAAAA CCTTGGACAT TGCGCAAAGT
GCGCTAACCC AAATTTTAGG CGCTACAGAA ACCGTAGAAC CGAGTGGCAT GCTGTTCATC
AACACCAGCT TACCGCCCAT GCACGCCTTC ATCGAACAAA CGCTCAATAC CTATCCCGGT
TTAAGCCTGC TCGATGCCAA AGAAAAGCAA GCCAGCAGTC TCATTAAAGC TGAGCAAGGG
AAATACTACC CAGAAGTCTA TCTGTATGGC GATTATAGCT TGCATGAAGA TGACTCACTC
GCTAGCCAAA TGAAACCGGA TTGGTTGGTT GGCGTTGGTG TGAATATTCC GCTGATTGAA
AACAGCGGGC GCAGTGAACA AGTCAAAGCA GCCAATAGCG CAGTGAATCA AGTGCGCTAT
TTAAAAGCAC AAGCAAAACA AGATCTCAGC GTGCTGGTGG AAAAGACCTA TCTCGAAGCA
GAACAAGCGT TAGAAGAAGT CACAGGACTC AATTCCAGTC TGAATTTGGC ACAAGAGAAC
CTGCGTTTAC GCCAAAAAGC GTTCAGCCAA GGTTTATCCA CCTCCGTCGA TGTGGTAGAT
GCCGAGCTTT ATCTGGCCAG CATTCGCACC CAACAATCGC TAGCGAGCTT TAACTATCTC
ATTTCACTAA ACAAATTATT GGCTCTGTCG AGCGAGATGA GCAGCTTCTC CACTTACCAT
CAATCCGCAG TTGCTCTCTC TTCACTGCAC CAAAGCGCCA CGGCTAAGTA A
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| Protein sequence | MKVKSLSLAI CSILFMPIAH AAPLSFQEAW DLLQQQNNSL AAQRANVERY AHLKDATQNL
NLPSVSVGAN FTRLDQDVTL SGKQIVDSAG GIDPNLIASL SPSLLPLVTH LGAAKSTITE
RDIFTSSIRA IWPIFTGGRI TAAQDAAAGK EEEAQSQLAM EIQARYEDLA KYYFSVVLAK
EVLATRIAVE EGLTQHRDNA LKLEQQGQIA HVERLQADAS LDKAKVERKK AQKTLDIAQS
ALTQILGATE TVEPSGMLFI NTSLPPMHAF IEQTLNTYPG LSLLDAKEKQ ASSLIKAEQG
KYYPEVYLYG DYSLHEDDSL ASQMKPDWLV GVGVNIPLIE NSGRSEQVKA ANSAVNQVRY
LKAQAKQDLS VLVEKTYLEA EQALEEVTGL NSSLNLAQEN LRLRQKAFSQ GLSTSVDVVD
AELYLASIRT QQSLASFNYL ISLNKLLALS SEMSSFSTYH QSAVALSSLH QSATAK
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