| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1209 |
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| Symbol | |
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| ID | 5135889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1271036 |
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| End bp | 1271722 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532667 |
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| Product | response regulator |
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| Protein accession | YP_001217153 |
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| Protein GI | 147673209 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4565] Response regulator of citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000538312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCC GACTCCTGAT CATTGAAGAT GATGCTGCGA TAGCGCAGCT TCATCATCGC
TATTTAAGTC AGTTAGAAGG CTTTGAGGTA GTGGGGATCG CGATGTCTCA AGCGGATGCG
CGTTTACAGA TGGAAGTGCT TAACCCTGAT TTGGTGCTGT TGGACGTTTA TTTACCGGAT
GGAACGGGCC TTGAGCTGTT GCAATGGATT CGTGGACGTA ATGTTCATTG CGATGTGATT
TTAATTACGG CGGCGCGCGA GGTGGAGACA CTGCAACAAG CGATGCGTGG TGGTGTGGTG
GATTATCTGC TCAAGCCTGT GATGTTTCCA AGGCTGGAAA CCGCACTAAG AAAATACCAA
ATGCGGCAAG CTGAGCTAAA ACAGTTGGCG GATTTTGATC AGCAGAAAGT CGACAAAATG
TTCACCACAC ATTCCTCAGA AGCCTTACCG CAACGTTTAC CGAAAGGCAT TGACGCCGTG
ACATTGGATA AGATTCGGTT GCTATTTCAA ACGGCTACCA TGCTGACGGC GGACGAGGCA
GGTGAAAAAA TTGGGGCTAG CCGCACAACA GCCCGACGCT ATCTTGAGTA TCTTATCACT
GCTGGAGAGT TGGAGGCCGA TCTCAGTTAT GGTACGGTGG GACGCCCAGA ACGAACGTAC
CGTAAATTAC ATCGTCACAC ATCCTGA
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| Protein sequence | MKTRLLIIED DAAIAQLHHR YLSQLEGFEV VGIAMSQADA RLQMEVLNPD LVLLDVYLPD
GTGLELLQWI RGRNVHCDVI LITAAREVET LQQAMRGGVV DYLLKPVMFP RLETALRKYQ
MRQAELKQLA DFDQQKVDKM FTTHSSEALP QRLPKGIDAV TLDKIRLLFQ TATMLTADEA
GEKIGASRTT ARRYLEYLIT AGELEADLSY GTVGRPERTY RKLHRHTS
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