| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1204 |
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| Symbol | |
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| ID | 5137717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1266860 |
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| End bp | 1267447 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640532662 |
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| Product | GGDEF family protein |
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| Protein accession | YP_001217148 |
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| Protein GI | 147673926 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.040239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTGCCC ATGTTTACGA AGATAACCGA CGTAAAATTG AAAACTCCCT ACTCTATCTT
GCTTCGCGTG ATCCTTTAAC TGGCGCACAC AACCGTTTGT CACTCACTAC ATCATTTCAA
CATTTTGAAC GGTTTAGTGA TCAAACCTCA CTCTGTTTGC TCGTCATTGA TTTGGATTTT
TTCAAATCGA TTAATGATCA ATTCGGCCAT GACACCGGAG ATAAAGTGCT GATTGAAACC
ACTCGCCTTT TTACTCAAGT TGTCGGTGAC AACAATTTAT ATCGAATTGG CGGTGAAGAG
TTTTGCGTTA CTTTATTTGA TCAATCGCTT GAGCAAGCTG GGCGTGTTTG CGAACACTTA
AGAGCGATTG TCAGCCAGCA TCTGTTCGCG TTTAGAGAGA AACGAGTACA AGTGACGATC
AGTATCGGTG TGTGTGAATA TCAAGCAGGA GATCAACTGA ACGATCTCCT GAAATTTGCG
GATATGGAAT TGTATCGAGC CAAAAAGGCG GGAAGAAATC AGGTTCGCCT ATTCAGACAT
GGCTCAACCA ATCCTACTAT GGTTAATCAA CAAACCGAGA ACGTGTGA
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| Protein sequence | MVAHVYEDNR RKIENSLLYL ASRDPLTGAH NRLSLTTSFQ HFERFSDQTS LCLLVIDLDF
FKSINDQFGH DTGDKVLIET TRLFTQVVGD NNLYRIGGEE FCVTLFDQSL EQAGRVCEHL
RAIVSQHLFA FREKRVQVTI SIGVCEYQAG DQLNDLLKFA DMELYRAKKA GRNQVRLFRH
GSTNPTMVNQ QTENV
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